TCONS_00048987-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048987-protein
Unique NameTCONS_00048987-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1038

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048987-protein ID=TCONS_00048987-protein|Name=TCONS_00048987-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1038bp
GTNGPIWMNGLHPDTIGQTKTVPVCVRFQSACCKDTFNIDVKKCQEGNEE
FYVYNLLPAPGCPESYCIGSETQCPEGKLSPNGFTPGCTDQYPRLSGIPT
VTVDQKVLNFTCKFTPQYPNSNAKHQVLWYGAPPNANRKLLKKETLQGTA
HQSYLYNKQAEDLTFLSMQDIYCEVHSYFANSATVTDKKRSDFFYAGIKI
SPQTMILKESDGPKDITFKTTVPITCGPGITSCKLVIEVAQTVKDFVLSF
CTVSFDNGGPGQVKTLSVDAKRDFLDDGDKTLKITFSIQRRLRLSEWWIN
HESIPEVTVNTQDVATGQCQSWGDPHIVPFNEITTYYDHMRVGDYILAKS
NARLFEVQTRSFQCGTVACNCAVAVREGDDVMIVDSCRTGIPRARFASTV
EPQPGSIMERSTNGKQFTLKFPSGSQVIVDIFRWFAFSDYYWLFTITVLV
PPEDYRNTSGLCGNWDQIIPNNNPNTPFNMKSKDGTVYEVAPRTIAPTGF
TESWKLSPGTSLFYYRGGPKKCHHKRTHKKCFCDTNAHMNQQINCTANNV
VDRPQYNNGNNGFQKLLSPVSEHCGRRRKRRDIGDDEIVLPDDGEDAFYF
YDPPQPNGTLPSFPTPNGITEQQADQECDQILRQSDIGKVCLKMIPDLGI
DQYKHSCKFDAMVLDDLNAAKFSSLGVLKNECEEKALKNLSLWETGQNGN
LQPPQAVGNALCPSDCSGKGKCVNSTCVCDAGYLSTDCSIQTGDKPTLEK
VAFNGLCDIRNKDCLRTRVVGKNFVNSPKLACQTNKLKFTTDHGIDPTFN
GESTVQKSQLLSFAELTCDIPNVPVDIMFSSTQKGIPVGGFDIRLSNDGT
SFTSQSSQFVIYDSKCLICDAASHNCRWKDDSCRVNNYCFANGESHPTDW
CQKCVGQNTFTARKDNLAPVFRTSTPYKVFKHARMNFTIPVSDPEQKRMT
YEFVGDSYGMEISSVGILTWTPGGENRTYTVTIKATDICGNSSQASYDIE
VVHCPCESSNGAACKWTSNKGDFSCVCPSGCTGKYCTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031115XLOC_031115Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048987TCONS_00048987Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR013032EGF-like_CS
IPR001846VWF_type-D
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 907..995
e-value: 5.8E-14
score: 52.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 195..295
e-value: 0.096
score: 12.6
NoneNo IPR availableGENE3D2.10.25.10coord: 996..1038
e-value: 0.15
score: 11.7
NoneNo IPR availableGENE3D2.60.40.1510coord: 361..739
e-value: 8.4E-7
score: 28.9
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 1025..1036
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 318..548
score: 13.943

Blast
BLAST of TCONS_00048987-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 169.859 bits (429), Expect = 1.295e-42
Identity = 120/463 (25.92%), Postives = 207/463 (44.71%), Query Frame = 0
Query:  593 DGEDAFYFYDPPQPNGT----LPSFPTPNGITEQQADQECDQILRQSDIGKVCLKMIPDLGIDQYKHSCKFDAMVLDDLNAAKFSSLGVLKNECEEKALKNLSLWETGQNGNLQPPQAVGNAL----CPSDCSGKGKCVNSTCVCDAGYLSTDCSIQTGDKPTLEKVAFNGLCDIRNKDCLRTRVVGKNFVNSPKLACQTNKLKFTTDHGIDPTFNGESTVQKSQLLSFAELTCDIPNVPVDIMFSSTQKGIPVGGFDIRLSNDGTSFTSQSSQFVIYDSKCLICDAASHN-CRWKDDSCRVNNYCFANGESHPTDWCQKC---VGQNTFTARKDNLAPVFRT-STPYKVFKHARMNFTIPVSDPEQKRMTYEFVGDSYGMEISSVGILTWTPGGENRTYTVTIKATDICGNSSQASYDIEVVHCPCESSNGAAC----KWTSNKGDFSCVCPSGCTGKYCTV 1038
            D E+  YF+             PS+PTP+G+TE      C + L  S IG++CL  +    +D     C  D ++ DDL+ A+ + + +L+NECE++ +      E G+    +   ++ + L    CP+ CSG G+C+   C C   + S DCS      P + ++   G CD++  +C+  RV GK F   P + C+  KL++ +   +     GE    ++   +   + C +P             G P G + +++SNDG  F S     VIYD  C +C    ++ C  K++ C ++  C+  G+ +PT  C  C   + + T++  ++N  PV +      + F      +     DPE   + +       G  +SS G+  W       T  +T++  D C   ++ + ++ V  C C   NG +C     ++   G + CVC  G  G  C V
Sbjct:  771 DLEELTYFFPEDHAEDVQQEFFPSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGKR-LDSVIEMCVKDVLLKDDLSWAE-AGVALLENECEKRIV------EEGKYNTEEYGTSIEDILSVLKCPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNSSEWMP----GEPIYTQTVFHNSRAVDCQLPTDVQQFDTMDLVGGKPTGKWQLKVSNDGYKF-SNPKITVIYDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAFDPEGSDIHFTLDSGPEGASVSSAGLFMWKTDLLT-TQQITVRLNDDCDAETRVTIEVTVKSCDC--LNGGSCVSDRNFSPGSGVYLCVCLPGFHGSLCEV 1217          

HSP 2 Score: 142.51 bits (358), Expect = 3.729e-34
Identity = 143/555 (25.77%), Postives = 235/555 (42.34%), Query Frame = 0
Query:    1 GTNGPIWMNGLHPDTI---GQTKTVPVCVRFQ------SACCKDTFNIDVKKCQEGNEEFYVYNLLPAPGCPESYCIGSETQCPEGKLSPNGF----TPG-CTDQY-----PRLSGIPTVTVDQKVLNFTCKFTPQYPNSNAKHQVLWYGAPPNANRKLLKKETLQGTAHQSYLYNKQAEDLTFLSMQDIYCEVHSYFANSATVTDKK-RSDFFYAGIKISPQTMILKESDGPKDITFKTTVPITCGPGIT---SCKLVIEVAQTVK-------DFVLSFCTVSFDNGGPGQVKTLS-----VDAKRDFLDDGDKTLKITFSIQRRLRLSEWWINHESIPE-VTVNTQDVATGQCQSWGDPHIVPFNEITTYYDHMRVGDYILAKSNARLFEVQTRSFQCGT----VACNCAVAVREGDDVMIVDSCRTGIPRAR---FASTVEPQPGSIMERSTNGKQFTLKFPSGSQVIVDIFRWFAFSDYYWLFTITVLVPPEDYRNTSGLCGNWDQIIPNNNPNTPFNMKSKDGTVYEVAPRTIAPTGFTESWKLSPGTSL 512
            GT  PIW++    +T+   G+ K +  C  +Q        CC     + V+ C  GN  F VY L P  GC   YC  + +   + +L P G     T G C  Q      P  +G P V V+       C+ +   P +  K+ V ++ A    + + +K+E  Q T  Q++    + + +       I+C    +F  +  V      S  F+AG K+ P+   + E      +  ++TVPI C         CK+ +++    +       +  LS C V           T S       A  DF  DGD+   I   +Q  +     W N+  IP+ + +  +DV T  C ++ DPHI+ F+     YD+ + G ++L KS +R FEV  R + C +    V+CNC    +EG D++  D C   +  ++   F  + +      +  S  G++ T+ F SG+ +  D+  W          ++T+  P  DYRNT GLCG +D+     NP   F+    D    ++         F   W++ PG S+
Sbjct:   86 GTQAPIWLSLRDSETLPSPGEIKQLTACATWQFLFSTTKDCCLFQIPVSVRNC--GN--FSVYLLQPTQGC-MGYCAEAIS---DARLHPCGSDETETGGDCVRQLAASLPPPPAGRPEVLVELIESRLFCRCSFDVPAT--KNSVGFHIAWSRLSSQEVKEELTQETTVQAFSL-LELDGINLRLGDRIFCSASVFFLENPHVQSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKLKTIGQGREHLGLNLALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNIV--VQPIVNEDFLWNNY--IPDSIQIKVKDVPTAYCYTFTDPHIITFD--GRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEWG--------MSLTIRAPSVDYRNTLGLCGTFDE-----NPENDFH----DKNGMQIDQNFNNYVAFINEWRILPGKSM 606          
The following BLAST results are available for this feature:
BLAST of TCONS_00048987-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWDE1.295e-4225.92von Willebrand factor D and EGF domain-containing ... [more]
back to top