TCONS_00049315-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049315-protein
Unique NameTCONS_00049315-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length443

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049315-protein ID=TCONS_00049315-protein|Name=TCONS_00049315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MNEEYDCIILGTGLTECILSGIISKSGKKVLHMDRNNYYGAESASMTPLA
DLYKLFKEEIGSDDKYGRGRDWNVDLIPKFIMANGELTKLLIHTDVTRYL
EFKQIEGSYVFKKGNNVYKVPADDKEALASSLMGIFEKRRFRNFLIWAMN
LKFDDPKTFQNLDPEKSTMRDVFKKFGLDQNTADFTGHAICLFLKDDYLD
KPYKDAITKLKLYYDSLSSYGKSPYLYPLYGLGELPQGFARLSAVYGGTY
MLDKPVEEIVMEDGKVVGVKSGGETAKTKMVIADPSYFPDRVKKVSQVVR
AICLLKHPIQKAGNSPSFQLIIPANQAGRKSDIYVGVLSNQNQVASKDYY
LGFVSTTVETSNPEAELKVGLDLLEPIEKKFVSVKDVFAPTDDGKDSQIF
ISRSYDATSHFETTCEDIKDIYKRINNEEFDFEKVKGSLGEEQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031287XLOC_031287Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049315TCONS_00049315Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000806RabGDI
IPR018203GDP_dissociation_inhibitor
IPR023753FAD/NAD-binding_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005093Rab GDP-dissociation inhibitor activity
GO:0005092GDP-dissociation inhibitor activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0007264small GTPase mediated signal transduction
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015031 protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
molecular_function GO:0005092 GDP-dissociation inhibitor activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005093 Rab GDP-dissociation inhibitor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000806Rab GDI proteinPRINTSPR00892RABGDIcoord: 280..294
score: 56.52
coord: 402..422
score: 71.22
coord: 16..28
score: 68.56
coord: 76..89
score: 70.81
coord: 323..339
score: 60.1
coord: 348..366
score: 54.46
coord: 184..198
score: 58.55
coord: 127..142
score: 80.16
coord: 381..400
score: 41.52
IPR018203GDP dissociation inhibitorPRINTSPR00891RABGDIREPcoord: 87..103
score: 66.81
coord: 137..152
score: 45.76
coord: 24..41
score: 70.44
coord: 6..24
score: 70.49
coord: 231..252
score: 87.99
coord: 70..87
score: 74.21
coord: 213..230
score: 58.13
IPR018203GDP dissociation inhibitorPFAMPF00996GDIcoord: 1..435
e-value: 3.3E-211
score: 701.3
NoneNo IPR availableGENE3D3.30.519.10coord: 53..173
e-value: 1.4E-28
score: 99.0
NoneNo IPR availableGENE3D3.30.519.10coord: 247..387
e-value: 1.7E-32
score: 111.8
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 292..388
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 1..290
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 390..435

Blast
[Close]
BLAST of TCONS_00049315-protein vs. Swiss-Prot (Human)
Match: GDIB (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2)

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 281/436 (64.45%), Postives = 353/436 (80.96%), Query Frame = 0 
Query:    1 MNEEYDCIILGTGLTECILSGIISKSGKKVLHMDRNNYYGAESASMTPLADLYKLFKEEIGSDDKYGRGRDWNVDLIPKFIMANGELTKLLIHTDVTRYLEFKQIEGSYVFKKGNNVYKVPADDKEALASSLMGIFEKRRFRNFLIWAMNLKFDDPKTFQNLDPEKSTMRDVFKKFGLDQNTADFTGHAICLFLKDDYLDKPYKDAITKLKLYYDSLSSYGKSPYLYPLYGLGELPQGFARLSAVYGGTYMLDKPVEEIVMEDGKVVGVKSGGETAKTKMVIADPSYFPDRVKKVSQVVRAICLLKHPIQKAGNSPSFQLIIPANQAGRKSDIYVGVLSNQNQVASKDYYLGFVSTTVETSNPEAELKVGLDLLEPIEKKFVSVKDVFAPTDDGKDSQIFISRSYDATSHFETTCEDIKDIYKRINNEEFDFEKVK 436
            MNEEYD I+LGTGLTECILSGI+S +GKKVLHMDRN YYG ESAS+TPL DLYK FK      +  GRGRDWNVDLIPKF+MANG+L K+L++T+VTRYL+FK  EGS+V+K G  +YKVP+ + EALASSLMG+FEKRRFR FL++  N    DP+TF+ +DP+K+TMRDV+KKF L Q+  DFTGHA+ L+  DDYLD+P  + I ++KLY +SL+ YGKSPYLYPLYGLGELPQGFARLSA+YGGTYML+KP+EEI++++GKV+GVKS GE A+ K +I DPSY  DRV+KV QV+R IC+L HPI+   ++ S Q+IIP NQ  RKSDIYV ++S  + VA++  Y+  VSTTVET  PE E++  L+LLEPIE+KFVS+ D+  P D G +SQIFISR+YDAT+HFETTC+DIK+IYKR+   EFDFE++K
Sbjct:    1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYK-GGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDFEEMK 435
The following BLAST results are available for this feature:
BLAST of TCONS_00049315-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDIB0.000e+064.45Rab GDP dissociation inhibitor beta OS=Homo sapien... [more]
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