TCONS_00049330-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049330-protein
Unique NameTCONS_00049330-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049330-protein ID=TCONS_00049330-protein|Name=TCONS_00049330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MMKTQEMFVACVLLFETQLVHIAAVRYELVVENSAPSKLPFSSTDVKFEQ
HCISKCHYMIKCASFLIEPTSNINPIKCSFYNTTTTKVTGDFQTSTGSKL
FTDIRDCQDVYDRGSKASGFYSVNLLGKGERDVFCNMDFQGGGWMAFTYR
IHGGGWWDTKFDKYKNGFGRAPEDYYLGNENLHQLTKSGEYELYYLTDAR
DTPTTYHGWYGQFSVSDEADFYRLSIGDFREGTDVFFTGNGKQFTAKDVD
KDGNNDRNCASMKKGGFWYVNCGRVYPHSKFGNLHKPALCIGLQPAQDGL
KVCCKNFQIFLRRNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031301XLOC_031301Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049330TCONS_00049330Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 102..296
e-value: 9.0E-23
score: 91.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 105..280
e-value: 1.8E-36
score: 125.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 98..273
score: 28.978
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 103..279
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 40..244
e-value: 2.3E-36
score: 125.1
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 245..288
e-value: 7.9E-10
score: 38.3

Blast
[Close]
BLAST of TCONS_00049330-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 6.878e-30
Identity = 67/173 (38.73%), Postives = 95/173 (54.91%), Query Frame = 0 
Query:  105 RDCQDVYDRGSKASGFYSVNLLGKGERDVFCNMDFQGGGWMAFTYRIHGGGWWDTKFDKYKNGFGRAPEDYYLGNENLHQLTKSGEYELYY-LTDARDTPTTYHGWYGQFSVSDEADFYRLSIGDFREGT--DVFFTGNGKQFTAKDVDKDGNNDRNCASMKKGGFWYVNCGR 274
            R+C+++  +G+  SG+Y + L       VFC+MD +GGGW+ F  R  G   +   +  Y+ GFG    +++LGNENLHQLT  G +EL   L D     T  H  Y  F +  E D Y+L++G F EGT  D     +G+ FT  D D D +N  NCA +  G +WY +C R
Sbjct:   91 RNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAH--YATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNS-NCAVIVHGAWWYASCYR 260
The following BLAST results are available for this feature:
BLAST of TCONS_00049330-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN36.878e-3038.73Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
back to top