TCONS_00049331-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049331-protein
Unique NameTCONS_00049331-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049331-protein ID=TCONS_00049331-protein|Name=TCONS_00049331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
ENVFFMTMLCLIILSYLLDSQVIIAARYELAFMNLKPSKLPYSSTDVKFE
QHCISKCHYMIKCASFLIELTSNINPIKCSFYNTTTTKVTGDFQTSTGSK
LFTDIRDCQDVYDRGSKASGFYSVNLLGKGERDVFCNMDFQGGGWMAFTY
RIRGGVWWDTKFDKYKNGFGRAPKDYYLGNENLHQLTKSGEYELYYLTDA
RDTPTIYHGWYGQFIVSDEADFYRLSIGDFREGTDVFFTGNGKQFTAKDV
DKDGNNDGNCAIIKKGGFWYANCGRVQPHSKFGNLHEPALCIGLKPVQDG
PKVCCKNFQIFLRRNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031302XLOC_031302Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049331TCONS_00049331Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 103..297
e-value: 4.8E-23
score: 92.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 106..282
e-value: 8.5E-37
score: 127.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 99..274
score: 29.233
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 104..282
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 44..245
e-value: 1.3E-36
score: 125.9
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 246..289
e-value: 2.9E-10
score: 39.7

Blast
[Close]
BLAST of TCONS_00049331-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 4.854e-33
Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = 0 
Query:  106 RDCQDVYDRGSKASGFYSVNLLGKGERDVFCNMDFQGGGWMAFTYRIRGGVWWDTKFDKYKNGFGRAPKDYYLGNENLHQLTKSGEYELYY-LTDARDTPTIYHGWYGQFIVSDEADFYRLSIGDFREGT--DVFFTGNGKQFTAKDVDKDGNNDGNCAIIKKGGFWYANCGRVQPHSKF 282
            R+C+++  +G+  SG+Y + L       VFC+MD +GGGW+ F  R  G V +   +  Y+ GFG    +++LGNENLHQLT  G +EL   L D     T  H  Y  F +  E D Y+L++G F EGT  D     +G+ FT  D D D +N  NCA+I  G +WYA+C R   + ++
Sbjct:   91 RNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAH--YATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNS-NCAVIVHGAWWYASCYRSNLNGRY 267
The following BLAST results are available for this feature:
BLAST of TCONS_00049331-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN34.854e-3338.89Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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