TCONS_00049348-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049348-protein
Unique NameTCONS_00049348-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length382

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049348-protein ID=TCONS_00049348-protein|Name=TCONS_00049348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MNYDIGNIVHFSNSDGIATPLTLFFNVTIDDKFIGSCQFTIENVSLKVEL
GDNHGNNFLFKPNKIEEGLENKREESSPDINKNRLGLGEEVTIKMENDMK
IKVEPEENLDEEQTDTQAAENRLDNSGKAIEQGSEMLEEDKVENPSNCHA
SGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQNKNTPTVKKPFTC
EICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSD
EKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIH
TRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHSDKKPFSCEVCEKGFNTK
SNMLVHMRIHDDKKPIKSDEGGKEFAQNDNAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031319XLOC_031319Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049348TCONS_00049348Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 338..360
e-value: 1.6E-4
score: 31.0
coord: 310..332
e-value: 0.003
score: 26.8
coord: 226..248
e-value: 0.0013
score: 28.0
coord: 282..304
e-value: 6.8E-4
score: 28.9
coord: 198..220
e-value: 0.0077
score: 25.4
coord: 254..276
e-value: 0.0018
score: 27.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 284..304
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 256..276
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 228..248
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 340..360
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 200..220
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 312..332
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 310..337
score: 14.046
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 282..309
score: 14.773
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 254..281
score: 16.893
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 338..365
score: 14.191
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 226..253
score: 14.336
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 198..225
score: 13.671
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 309..360
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 220..272
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 263..319
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 187..234
NoneNo IPR availableGENE3D3.30.160.60coord: 323..346
e-value: 1.3E-17
score: 63.4
NoneNo IPR availableGENE3D2.40.155.10coord: 141..196
e-value: 0.0018
score: 17.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 198..220
e-value: 2.1E-4
score: 21.4
coord: 338..360
e-value: 2.8E-5
score: 24.2
coord: 254..276
e-value: 7.1E-6
score: 26.1
coord: 282..304
e-value: 3.3E-5
score: 24.0
coord: 226..248
e-value: 1.1E-4
score: 22.3
coord: 310..332
e-value: 5.5E-5
score: 23.3
NoneNo IPR availableGENE3D2.20.28.30coord: 238..265
e-value: 1.1E-17
score: 63.5
NoneNo IPR availableGENE3D3.30.160.60coord: 197..211
e-value: 4.2E-11
score: 42.4
NoneNo IPR availableGENE3D3.30.160.60coord: 287..299
e-value: 9.7E-13
score: 47.6
NoneNo IPR availableGENE3D3.30.160.60coord: 300..322
e-value: 6.3E-17
score: 60.8
NoneNo IPR availableGENE3D2.20.28.10coord: 347..382
e-value: 6.4E-13
score: 48.3
NoneNo IPR availableGENE3D3.30.160.60coord: 212..237
e-value: 8.0E-18
score: 64.1
coord: 266..286
e-value: 2.3E-19
score: 69.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..382

Blast
BLAST of TCONS_00049348-protein vs. Swiss-Prot (Human)
Match: ZN300 (Zinc finger protein 300 OS=Homo sapiens GN=ZNF300 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.565e-59
Identity = 102/257 (39.69%), Postives = 146/257 (56.81%), Query Frame = 0
Query:  127 GKAIEQGSEMLEEDKV---ENPSNCHASGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQNKNTPTVKKPFTCEICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSDEKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIHTRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHSDKKPFSCEVCEKGFNTKSNMLVHMRIHDDKKPIKSDEGGKEFAQNDN 380
            GKA  + S+++   ++   + P +C A GKAFS                        E+F    ++ T T +KP+ C  CG  FS+K +L IH R+HTG+  ++C  CGK +++K  L IH   H+ EKP+ C  CGK F++K  L  H R+HTGEKP+ C  CGK+F +K  L+IH RIHTG  P+KC  CE+ F+R  +L  H L H+ +KP+ C  C K F+ KS +++H R H  +KP K  E GK F Q  +
Sbjct:  275 GKAFAKKSQLIVHQRIHTGKKPYDCGACGKAFS------------------------EKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSH 507          

HSP 2 Score: 191.045 bits (484), Expect = 3.897e-55
Identity = 106/274 (38.69%), Postives = 146/274 (53.28%), Query Frame = 0
Query:  116 TQAAENRLDNS--GKAIEQGSEMLEEDKV---ENPSNCHASGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQ----NKNTPTVKKPFTCEICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSDEKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIHTRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHSDKKPFSCEVCEKGFNTKSNMLVHMRIHDDKKPIKSDEGGKEFAQNDN 380
            T   E   D S  GKA  Q S ++   +V   E P  C   GKAFSQ + L   + +    K  E    G+ F+ +     +    T +KP+ C  CG  F  K  L IH R+HTG+  +KC  C + ++RK +L  H L H+ EKP+ C  CGK F+RK  L  H R+HTGEKP+ C  CGK+F QK  L+ H RIHTG  P+ C  C K F++   L  H   H+ +KP+ C  C K F+ KS++++H RIH  ++P +    GK F Q   
Sbjct:  318 THTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQ 591          

HSP 3 Score: 181.8 bits (460), Expect = 9.140e-52
Identity = 100/261 (38.31%), Postives = 139/261 (53.26%), Query Frame = 0
Query:  127 GKAIEQGSEMLEEDKV---ENPSNCHASGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQ----NKNTPTVKKPFTCEICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSDEKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIHTRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHSDKKPFSCEVCEKGFNTKSNMLVHMRIHDDKKPIKSDEGGKEFAQNDN 380
            GKA  +   ++   +    E P +C   GKAFSQ + L   + +    K  E    G+ F+ +     ++   T +KP+ C  CG  FS+K  L IH R HTG+  ++C  CGK +  K  L IH   H+ EKP+ C  C + F+RK  L  H   HTGEKP+ C  CGK+FS+K  L+IH R HTG  P+KC  C K F +   L  H   H+ +KP+ C  C K F+ KS++  H RIH  +KP    E GK F+Q  +
Sbjct:  303 GKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSD 563          

HSP 4 Score: 180.259 bits (456), Expect = 3.992e-51
Identity = 98/241 (40.66%), Postives = 131/241 (54.36%), Query Frame = 0
Query:  127 GKAIEQGSEMLEEDKV---ENPSNCHASGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQN----KNTPTVKKPFTCEICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSDEKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIHTRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHSDKKPFSCEVCEKGFNTKSNMLVHMRIH 360
            GKA  Q S ++   ++   E P  C   GKAFSQ +QL          K  E    G+ F  + +    K   T +KP+ C  C   FSRK  L  H  +HTG+  ++C  CGK ++RK +L IH  +H+ EKP+ C  CGK F +K +L  H R HTGEKP+ C  CGK+FSQK  L  H RIHTG  P+ C  C K F++   L  H   H+ ++P+ C +C K F  KS + VH RIH
Sbjct:  359 GKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTVHQRIH 599          

HSP 5 Score: 151.754 bits (382), Expect = 8.492e-41
Identity = 84/214 (39.25%), Postives = 117/214 (54.67%), Query Frame = 0
Query:  127 GKAIEQGSEMLEEDKV---ENPSNCHASGKAFSQYNQLGYIRSLDNINKLNEYEVPGERFTGQQ----NKNTPTVKKPFTCEICGNGFSRKDTLKIHTRLHTGQVSFKCEVCGKEYTRKDKLKIHLLSHSDEKPFNCGVCGKGFARKDNLTDHLRSHTGEKPFPCKVCGKSFSQKGGLLIHTRIHTGFAPFKCHLCEKRFTRNDQLRNHLLTHS 333
            GKA  Q S+++   +    E P  C   GKAF + + L   + +    K  +     E F+ +     ++   T +KP+ C  CG  FSRK  L IH R HTG+  +KC  CGK + +K  L  H   H+ EKP+ C  CGK F++K +L  H R HTGEKP+ C  CGK+FSQK  L++H RIHTG  P++C +C K F +  QL  H   H+
Sbjct:  387 GKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTVHQRIHT 600          
The following BLAST results are available for this feature:
BLAST of TCONS_00049348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3006.565e-5939.69Zinc finger protein 300 OS=Homo sapiens GN=ZNF300 ... [more]
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