TCONS_00049355-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049355-protein
Unique NameTCONS_00049355-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049355-protein ID=TCONS_00049355-protein|Name=TCONS_00049355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MYRNQYDHDVSIWSPQGRIFQIEYAMEAVKQGSATVGLKSNDYAVLVALK
RSSSELSSYQRKIISVDDHVAASIAGLTSDGRLLSNFMQDECLNSRYVYE
EALPVSRLVTATAEKMQKPTKVYGRRPFGVGILVAGYDSQGSHIYQLCPS
ANYFDCKSMAIGARSQSARTYLERNLDKFQESSYEEIIAHGLRSLRECLP
NEQELTTKNCTIAVVGKDKKLTLLDNEDVAPFLALIDQSKDKKDDKTEDA
TAAPESMEQDSTSQEEAMET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031326XLOC_031326Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049355TCONS_00049355Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_alpha-type
Vocabulary: Cellular Component
TermDefinition
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 6..28
e-value: 1.2E-9
score: 48.1
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 6..28
e-value: 1.2E-12
score: 47.1
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 6..28
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 29..215
e-value: 5.0E-48
score: 163.0
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 2..233
e-value: 2.3E-68
score: 229.5
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 4..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..270
NoneNo IPR availableCDDcd03749proteasome_alpha_type_1coord: 6..216
e-value: 6.94534E-134
score: 378.942
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 21..233
score: 68.779

Blast
[Close]
BLAST of TCONS_00049355-protein vs. Swiss-Prot (Human)
Match: PSA1 (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 6.887e-124
Identity = 161/263 (61.22%), Postives = 208/263 (79.09%), Query Frame = 0 
Query:    1 MYRNQYDHDVSIWSPQGRIFQIEYAMEAVKQGSATVGLKSNDYAVLVALKRSSSELSSYQRKIISVDDHVAASIAGLTSDGRLLSNFMQDECLNSRYVYEEALPVSRLVTATAEKMQKPTKVYGRRPFGVGILVAGYDSQGSHIYQLCPSANYFDCKSMAIGARSQSARTYLERNLDKFQESSYEEIIAHGLRSLRECLPNEQELTTKNCTIAVVGKDKKLTLLDNEDVAPFLALIDQSKDKKDDKT----EDATAAPESMEQ 259
            M+RNQYD+DV++WSPQGRI QIEYAMEAVKQGSATVGLKS  +AVLVALKR+ SEL+++Q+KI+ VD+H+  SIAGLT+D RLL NFM+ ECL+SR+V++  LPVSRLV+    K Q PT+ YGRRP+GVG+L+AGYD  G HI+Q CPSANYFDC++M+IGARSQSARTYLER++ +F E +  E++ HGLR+LRE LP EQ+LTTKN +I +VGKD + T+ D++DV+PFL  +++   +K        E A  A E ME 
Sbjct:    1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH 263
The following BLAST results are available for this feature:
BLAST of TCONS_00049355-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSA16.887e-12461.22Proteasome subunit alpha type-1 OS=Homo sapiens GN... [more]
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