TCONS_00049388-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049388-protein
Unique NameTCONS_00049388-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049388-protein ID=TCONS_00049388-protein|Name=TCONS_00049388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
MSHVKDCLFPQKCGADLLENVNNIAAESNEELRRYQDLFQMLSYEKITHC
DIQLCPSRSDDYIPKLYYETNKFTAFDQLWTIKAKVVGNEKIAARSLSYQ
LILKGKGNHEIKYFLTKGPFGDAKISPETQRFEFRDDNKESDYHHIALTE
ETDCNRLLAARTINFRIMMFLVKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031351XLOC_031351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049388TCONS_00049388Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38

Blast
[Close]
BLAST of TCONS_00049388-protein vs. Swiss-Prot (Human)
Match: CYHR1 (Cysteine and histidine-rich protein 1 OS=Homo sapiens GN=CYHR1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.272e-41
Identity = 67/178 (37.64%), Postives = 111/178 (62.36%), Query Frame = 0 
Query:    3 HVKDCLFPQKCGADLLENVNNIAAESNEELRRYQDLFQMLSYEKITHCDIQLCPSRSDDYIPKLYYETNKFTAFDQLWTIKAKVVGNEK----IAARSLSYQLILKGK--GNHEIKYFLTKGPFGDAKISPETQRFEFRDDNKESDYHHIALTEETDCNRLLAARTINFRIMMFLVKK 174
            H   C  P K G++L+E ++ +     +E++ Y  +F +LS+EKI + ++Q  P R+DD+I +LYYET +FT  +Q W +KA+V  +E+       R+LS+QL+LK K     E  + L KGP+ D +ISP    F F +++ E+DY  + + +  +CN+LLAA+ IN R+ +F ++K
Sbjct:  185 HEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSVECNKLLAAKNINLRLFLFQIQK 362
The following BLAST results are available for this feature:
BLAST of TCONS_00049388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CYHR14.272e-4137.64Cysteine and histidine-rich protein 1 OS=Homo sapi... [more]
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