TCONS_00049392-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00049392-protein
Unique Name	TCONS_00049392-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	384

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00049392-protein ID=TCONS_00049392-protein|Name=TCONS_00049392-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MLDHHGGGNSKLQRLFLVLLGGVIVLLALEGLSMVRSEARCTIQQVPVVI
QQGDRREKVPREFDLPDTHSERRLKTTKTTRKTVPTTEAKTTAEPVTDEN
IATDTPAPVIDQNRQTQLQRQQHLKEFCQNNRRLRTEKFKIRDFHFIYSD
KASALYCYIPKVACTNWKKVFQVMDGNYETPLDIKGKEKVHYLKFNTFEK
TNLTEIEWRRNLYYSFLFIRHPFERVLSAYRNKFQDPYNEQYQRVYGSRV
LRLFRKNLTEAEYKAGKNVTFREFADYVIRVHTKREFVNEHWDTMHNLCH
PCRVKYDYIGSMDSLIEDSETVLKEIGWYNRVKFPAKATDKYKNKLPTLM
KQYFSQLPRNVTMKLYKIYEADFKAFGYSADEYL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031352	XLOC_031352	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00049392	TCONS_00049392	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005331	Sulfotransferase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005331	Sulfotransferase	PFAM	PF03567	Sulfotransfer_2	coord: 145..379 e-value: 1.6E-45 score: 155.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..92

Blast

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BLAST of TCONS_00049392-protein vs. Swiss-Prot (Human)
Match: CHSTB (Carbohydrate sulfotransferase 11 OS=Homo sapiens GN=CHST11 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.604e-57
Identity = 94/243 (38.68%), Postives = 139/243 (57.20%), Query Frame = 0

Query:  145 HFIYSDKASALYCYIPKVACTNWKKVFQVMDG--NYETPLDIKGKEKVHYLKFNTFEKTNLTEIEWRRNLYYSFLFIRHPFERVLSAYRNKFQDPYNEQYQRVYGSRVLRLFRKNLTEAEYKAGKNVTFREFADYVIRVHTKR-EFVNEHWDTMHNLCHPCRVKYDYIGSMDSLIEDSETVLKEIGWYNRVKFPAKATDKYKNKLPTLMKQYFSQLPRNVTMKLYKIYEADFKAFGYSADEYL 384
            H +  +    +YCY+PKVACTNWK++  V+ G   Y  P++I   E        T  + ++ EI  R   Y  FLF+R PFER++SAYRNKF   YN  + + YG+++++  RKN T+   + G +V F EF  Y+I  HT+R E  NEHW T+++LCHPC + YD +G  ++L EDS  VL+  G  + +KFP  A  K       +  ++F  +      +LY++Y+ DF  F YS   YL
Sbjct:  109 HLVVDEDHELIYCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTYA--KSTRTTDEMTTEFFQNISSEHQTQLYEVYKLDFLMFNYSVPSYL 349

The following BLAST results are available for this feature:

BLAST of TCONS_00049392-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00049392-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CHSTB	9.604e-57	38.68	Carbohydrate sulfotransferase 11 OS=Homo sapiens G...	[more]

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TCONS_00049392-protein (polypeptide) - C. hemisphaerica