TCONS_00049409-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049409-protein
Unique NameTCONS_00049409-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length841

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049409-protein ID=TCONS_00049409-protein|Name=TCONS_00049409-protein|organism=Clytia hemisphaerica|type=polypeptide|length=841bp
MMGFFKYTTLLVLILLVGVLGQEKGSIVSKKCEYVFRANNQYFTSPGYPE
FYPNKAVCRWKIIADEGFHIKLTIINVDIEDSKHCKFDSVTVYDGEGDTA
IPIRRLCGTKLPENIQSISNVFTITMETDGYGNGKGFQMKYSIMPECLLV
SEGSTGVMESPGYPLGYPDGVSCNFHFPLVEVGKFIHIYFEDFQLEEVQH
YECFDHLSLLTLDESGEEKMEGQFCGTALKEKSLCFKTGQLSMKFVTDKM
WNTRGFKVSYMISEDECSAKDDISHLIDDTQQTVQLTDLQVLQQLLEREL
NEASYISSIVNKDEPINAEKSKLTNQHEVSSVKQPIGLQHLSPVPSIELQ
LQSSQTLVSRQVYLNSSNLHETVKTHAINTNHLLLNQYSKSKSIKEASQV
ETKSYKSNQIYKTKISKEHETSQYQFTQTPTLELKAISTIGSSYNIQPSK
SLYEKQFSTSPSRSIEVLQTSSISSKLEPSSTSYESIKESQTFEQSTFIG
SKYSEANQISSSSENDLSSMFIGQTTTNKDEIAESSRHLKASSEILSTRL
LMTSQSSIPPTKLRSESNFVTDKITPSISSTSYVYATEIGKSLATKVSSS
MTVDSDTISQSKESGKSKTLLANSDSEKVVSTETPAEKYQFSSKITGSQS
ISITDNEGAQQQTGTPMATETTETLCFAPISSLPASVLLKASHTASVLEA
HESKALKMEKIRMRCGRYLNFEWRGGRLPLDNLSLKAKEVIGNAFGSKIL
NTFEVCWPQDGLVGEQEIMNYGNLLTTAKGTKFLLRIQQNHIHLIEITAD
IVEAYEMKQLMELPTDSNKKESLKEYLRRIPSTVKVSLLFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031363XLOC_031363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049409TCONS_00049409Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000859CUB domainSMARTSM00042CUB_2coord: 32..144
e-value: 1.1E-33
score: 127.9
coord: 147..263
e-value: 4.4E-11
score: 52.8
IPR000859CUB domainPFAMPF00431CUBcoord: 32..141
e-value: 5.7E-26
score: 90.9
coord: 153..260
e-value: 2.8E-13
score: 50.1
IPR000859CUB domainGENE3D2.60.120.290coord: 146..267
e-value: 5.7E-18
score: 64.6
coord: 27..145
e-value: 1.3E-32
score: 111.9
IPR000859CUB domainPROSITEPS01180CUBcoord: 147..263
score: 15.426
IPR000859CUB domainPROSITEPS01180CUBcoord: 32..144
score: 21.797
IPR000859CUB domainCDDcd00041CUBcoord: 32..143
e-value: 4.22937E-33
score: 123.677
IPR000859CUB domainCDDcd00041CUBcoord: 150..260
e-value: 3.88431E-15
score: 72.0598
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 149..262
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 31..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 600..629

Blast
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BLAST of TCONS_00049409-protein vs. Swiss-Prot (Human)
Match: PCOC1 (Procollagen C-endopeptidase enhancer 1 OS=Homo sapiens GN=PCOLCE PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 4.045e-25
Identity = 70/237 (29.54%), Postives = 111/237 (46.84%), Query Frame = 0 
Query:   32 CEYVFRANNQYFTSPGYPEFYPNKAVCRWKIIADEGFHIKLTIINVDIEDSKHCKFDSVTVYDGEGDTAIPIRRLCGTKLPENIQSISNVFTITMETDGYGNGKGFQMKYSIMPE-------CLLVSEGSTGVMESPGYPLG-YPDGVSCNFHFPLVEVGKFIHIYFEDFQLEEVQHYECFDHLSLLTLDESGEEKMEGQFCGTALKEKSLCFKTGQLSMKFVTDKMWNTRGFKVSY 260
            C    +  + Y  S G+P  YP    C W I   EG  + L+    D+E    C++D++ V+ G G +   + R CGT  P  + +  N  T+ M TD    G+GF + YS           C    E + G + +P +P   YP G+SC++H  +    + I + FE F LE    Y  +D +S+     S + +  G+FCG A+   S+  +  +L ++FV+D      GF  SY
Sbjct:   37 CGGDVKGESGYVASEGFPNLYPPNKECIWTITVPEGQTVSLSFRVFDLELHPACRYDALEVFAGSGTSGQRLGRFCGTFRPAPLVAPGNQVTLRMTTDEGTGGRGFLLWYSGRATSGTEHQFCGGRLEKAQGTLTTPNWPESDYPPGISCSWHI-IAPPDQVIALTFEKFDLEP-DTYCRYDSVSVFNGAVSDDSRRLGKFCGDAVP-GSISSEGNELLVQFVSDLSVTADGFSASY 270
The following BLAST results are available for this feature:
BLAST of TCONS_00049409-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCOC14.045e-2529.54Procollagen C-endopeptidase enhancer 1 OS=Homo sap... [more]
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