TCONS_00049413-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049413-protein
Unique NameTCONS_00049413-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length648

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049413-protein ID=TCONS_00049413-protein|Name=TCONS_00049413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=648bp
MTCRLVDWICLPDPAIATDQWVMQVLKYLIQHKKYQVLSSVIDGKINQIF
HLVYLPVFRRRSLSLMTFMLISYLHSPKPFHEIAVLIPDLVAQLKKEETP
QATNDVVLLGELSFTLMYQYPGFPDIYEKLLASLQGVPKPSEEKMNTWLK
SSFSISQEELPQVIVPERLPNTKVGLDNLGNTCYANSVIQALFNLAHVRK
VLLERETDMTLSTTKSIQELFGLLLLTKRSSIAPRVFLNLSRPPWFQSGF
QQDCSEYLKYLLDKLQTESSKDTSKDINQLLSGQIRTSVECLNCGFVSSR
EEVFNDIPLSFNQEPLVAGGEKVVHTLKGGDSSDMKRKIGCKLSEASDAK
QTMTDDTISSLDTPFVDLTATETPPDPLQKFKIQEMMCSYLSPELLNNSN
KYYCETCASLQNAQKTMNILKYPKYLILTMKRFTYDVKTQKRSKLLHVVD
HPQTFDFCNECARCHSQNRVDSDESVAGSSSQNTTKNRECNSGNATHFRL
LSVIVHSGQSSDSGHYYAYTCEYLEDGNIKWLLLNDSRVSSAPNDCVSKL
SSRFPQDTPYVCIYECYEKNEEKQKEDEKELVINTQQKILDFVNADNMAY
ERELQREVIRKRKTFTSNFNNDKDEDGFGPCGPTGGGGGEIDGSKFVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031365XLOC_031365Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049413TCONS_00049413Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 174..564
e-value: 1.8E-38
score: 132.4
NoneNo IPR availableGENE3D3.90.70.10coord: 166..578
e-value: 1.7E-74
score: 250.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 623..648
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 170..312
coord: 386..566
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 498..516
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 175..190
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 174..567
score: 46.183

Blast
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BLAST of TCONS_00049413-protein vs. Swiss-Prot (Human)
Match: UBP38 (Ubiquitin carboxyl-terminal hydrolase 38 OS=Homo sapiens GN=USP38 PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 9.891e-96
Identity = 234/730 (32.05%), Postives = 341/730 (46.71%), Query Frame = 0 
Query:    3 CRLVDWICLPDPAIATDQWVMQVLKYLIQHKKYQVLSSVIDGKINQIFHLVYLPVFRRRSLSLMTFMLISYLHSPKPFHEIAVLIPDLVAQLKKEETPQATNDVVLLGELSFTLMYQYPGFPDIYEKLLASLQGVPKPSEEKMNTWLKSSFSISQE-ELPQVI--VPERLPNTKVGLDNLGNTCYANSVIQALFNLAHVRKVLLERETDMTLSTTKSIQELFGLLLLTKRSSIAPRVFLNLSRPPWFQSGFQQDCSEYLKYLLDKL-------------------------------------QTESSKDTSKD-INQLLSGQIRTSVECLNCGFVSSREEVFNDIPLSF----------NQEPLVA-----GG-----------EKVVHTLKGG----DSSDMKRKIGCKLSEASDAKQTM----TDDTISSLDTPFVDLTATETPPDPLQKFKIQEMMCSYLSPELLNNSNKYYCETCASLQNAQKTMNILKYPKYLILTMKRFTYDVKTQKRSKLLHVVDHPQTFDF----CNECARCHSQNRVDSD-----ESVAGSSSQNTTKNRECNSGNATHFRLLSVIVHSGQSSDSGHYYAYTCEY--------------------------------------LEDGNI--KWLLLNDSRVSSAPNDCVSKLSSRFPQDTPYVCIY-ECYEKNEEKQKEDEKELVIN----TQQKILDFVNADNMAYERE 603
            CR++DW+  P  A   D WV+ +LK L   +K+ +L  V   KI  +F+ ++ P+ R  +L++++ ML+S+ HSP+ FH I   + +LV   K +  P +T  +V L EL   +MY Y GFPD+YE +L +++  PKPSEEK+   L  S   SQ   L   +  +  +    K GL NLGNTCY NSVIQALF     R+ +L    +   S  K +Q LF  L  T+R + APR+F   SRPPWF    QQDCSEYL++LLD+L                                     +T  + D  K  I ++  G++RT + CLNC   S + E F D+ L+F           Q+P  +     GG           E VV+         DS   ++ IG   +E   ++ T     ++  + + D P       ET P       + +++  +L+PE+L   N+YYCE CASLQNA+KTM I + P+YLILT+ RF+YD K   R K+L  V  P   +         +       VD D     E++A     + T    C       + L SV+VHSG SS+SGHYY+Y                                          LE+  +  +W L NDSRV+      V K++SRFP+DT YV +Y + +  N          L IN     Q++++D +  DN  Y +E
Sbjct:  272 CRMIDWLSWP-LAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKNDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAAVLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMSVQDPASSPSIQDGGLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVP--QKPGGETTPS------VTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRITSFSSLSESWSVDVDFTDLSENLAKKLKPSGTDEASCT--KLVPYLLSSVVVHSGISSESGHYYSYARNITSTDSSYQMYHQSEALALASSQSHLLGRDSPSAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQE 990
The following BLAST results are available for this feature:
BLAST of TCONS_00049413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP389.891e-9632.05Ubiquitin carboxyl-terminal hydrolase 38 OS=Homo s... [more]
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