TCONS_00049422-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049422-protein
Unique NameTCONS_00049422-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049422-protein ID=TCONS_00049422-protein|Name=TCONS_00049422-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
ESLEREMDYKVASYLLLSCILISHVHSNNLTNTINTTNETPTNPPTYTIP
LILQNTTKLTPITITNEKITTKSMTTPITTTNNTTTKTTTTTATTTTTTT
PTTTTTMRPCRRMKFINRIHQANPEVLTLVGSTFVIDCSVDHTGGPEPSV
YWYKDDIPLQENSFRTFDEHRLNKTFRLRLENVDIPDNGKYKCTVDNVCS
KSITNTVSIIVREQRSDVPIISTFEPVNATRLVGEELQLTCGADLEDGEF
TPFIKWVRKTSENVTSHLNHTYNNTTSTTTTTTQPPFGIIQKKSDKIQNV
QNVPKMNTVSYIEDDVRYTVTDLKFERTASSTLSLEDLKEEDSGVYTCVM
SNLKGVVRKSSHVTINPSKYAFLQIEELFLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031372XLOC_031372Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049422TCONS_00049422Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 129..200
e-value: 0.0019
score: 27.5
coord: 232..355
e-value: 3.8E-5
score: 33.1
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 123..212
e-value: 6.3E-8
score: 42.3
coord: 226..366
e-value: 9.7E-10
score: 48.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 216..366
e-value: 4.2E-13
score: 48.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 117..215
e-value: 1.2E-16
score: 60.2
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 119..209
e-value: 1.8E-12
score: 47.1
NoneNo IPR availablePFAMPF13927Ig_3coord: 220..352
e-value: 2.7E-7
score: 31.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..105
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 219..364
score: 11.188
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 101..204
score: 12.241
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 119..212
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 219..276
coord: 321..365

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049422-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top