TCONS_00049426-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049426-protein
Unique NameTCONS_00049426-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length213

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049426-protein ID=TCONS_00049426-protein|Name=TCONS_00049426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
MINRISGFIDKHLQLIRGMTVATGCIGIILITRRYHLMKRYRHVSEIPKE
FITKKVFLRGKLERIEVCGTLLIQHSPILSFGFSKGSPSLRFSLAGVELQ
NGWYEHLQELQHKNILFQILQKNDKELKGVLFYKRGWLSKEMNVNEDLVG
RGLAITRCNIPSPLNVFLYQELMERLLKVELQADKKGIGIWRREREETFI
KRLIGWVKRKLQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031375XLOC_031375Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049426TCONS_00049426Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016071Staphylococal_nuclease_OB-fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.90coord: 85..201
e-value: 1.8E-7
score: 30.3
IPR016071Staphylococcal nuclease (SNase-like), OB-foldSUPERFAMILY50199Staphylococcal nucleasecoord: 110..192

Blast
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BLAST of TCONS_00049426-protein vs. Swiss-Prot (Human)
Match: CC033 (Protein C3orf33 OS=Homo sapiens GN=C3orf33 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 9.397e-23
Identity = 75/211 (35.55%), Postives = 115/211 (54.50%), Query Frame = 0 
Query:    1 MINRISGFIDKHLQLIRGMTVATGCIGIILITRRYHLMKRYRHVSEIPKEFITKKVFLRGKLERIEVCGTLLIQHS----PILSFGFSKGSPSLRFSLAGVELQNGWYEHLQ-ELQHKNIL-FQILQKNDKELKG-VLFYKRGWLSKEMNVNEDLVGRGLAITRCNIPSPLNVFLYQELMERLLKVELQADKKGIGIWRRERE-ETFIKRL 203
            ++ RIS + D HL+L+R ++      GI+L+ R   L  ++   S+IP EFI + V LRG+L RI   G L I+H     PI++    +   +L   LAGVEL       LQ EL+   +L FQ+L K +  L   +L  K G+ S  +N+NE+++ RGL  T        +  +Y  +   LLK EL A KKG GIW+ + E E+++++ 
Sbjct:   22 VVARISQWADDHLRLVRNISTGMAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENG-LEIEHIPITLPIIASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALFCYLLVSKGGYFS--VNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEGIWKEDSEKESYLEKF 229
The following BLAST results are available for this feature:
BLAST of TCONS_00049426-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC0339.397e-2335.55Protein C3orf33 OS=Homo sapiens GN=C3orf33 PE=1 SV... [more]
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