TCONS_00049441-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049441-protein
Unique NameTCONS_00049441-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length318

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049441-protein ID=TCONS_00049441-protein|Name=TCONS_00049441-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MAEIGPAVVIVGLLALILNFGVHKVEEGHVAVYYRGGALLSSTSGPGFHV
MFPFLTTFRSVQTTLQTDEVKNVPCGTSGGVVIYFDRIEVVNILTVSEVY
NIVKNYTADYDKSLIFNKVHHELNQFCSVHTLQEVYINLFDQIDENLKKA
LQEDLTQMAPGLKIQAVRVTKPKIPEQIRKNYELMEGEKTKLLITTQHQK
VMEKEAETERKLAVIQAEKHSQVAKIQYGQKIMEKESQRQISEIEDKTHL
AKQKAMADAEFYTQNKQAEANKLKLSPEYLDFMRIQAIANNNKIYYGNNL
PNVFIDKEMFQGKKKVAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031380XLOC_031380Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049441TCONS_00049441Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001107Band_7
IPR033294Erlin1/2
Vocabulary: Biological Process
TermDefinition
GO:0030433ubiquitin-dependent ERAD pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0031625ubiquitin protein ligase binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030433 ubiquitin-dependent ERAD pathway
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0031625 ubiquitin protein ligase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001107Band 7 domainSMARTSM00244PHB_4coord: 20..186
e-value: 1.9E-33
score: 127.1
IPR001107Band 7 domainPFAMPF01145Band_7coord: 24..195
e-value: 6.4E-20
score: 71.8
IPR001107Band 7 domainSUPERFAMILY117892Band 7/SPFH domaincoord: 52..182
IPR033294Erlin1/2CDDcd03406SPFH_like_u3coord: 15..306
e-value: 0.0
score: 555.754

Blast
[Close]
BLAST of TCONS_00049441-protein vs. Swiss-Prot (Human)
Match: ERLN2 (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 2.522e-168
Identity = 222/307 (72.31%), Postives = 262/307 (85.34%), Query Frame = 0 
Query:    1 MAEIGPAVVIVG-LLALILNFGVHKVEEGHVAVYYRGGALLSSTSGPGFHVMFPFLTTFRSVQTTLQTDEVKNVPCGTSGGVVIYFDRIEVVNILTVSEVYNIVKNYTADYDKSLIFNKVHHELNQFCSVHTLQEVYINLFDQIDENLKKALQEDLTQMAPGLKIQAVRVTKPKIPEQIRKNYELMEGEKTKLLITTQHQKVMEKEAETERKLAVIQAEKHSQVAKIQYGQKIMEKESQRQISEIEDKTHLAKQKAMADAEFYTQNKQAEANKLKLSPEYLDFMRIQAIANNNKIYYGNNLPNVFID 306
            MA++G  V +        L   VHK+EEGH+ VYYRGGALL+STSGPGFH+M PF+T+++SVQTTLQTDEVKNVPCGTSGGV+IYFDRIEVVN L  + VY+IVKNYTADYDK+LIFNK+HHELNQFCSVHTLQEVYI LFDQIDENLK ALQ+DLT MAPGL IQAVRVTKP IPE IR+NYELME EKTKLLI  Q QKV+EKEAETERK A+I+AEK +QVA+I YGQK+MEKE++++ISEIED   LA++KA ADAE YT  K AEANKLKL+PEYL  M+ +AIA+N+KIY+G ++PN+F+D
Sbjct:    1 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMD 307
The following BLAST results are available for this feature:
BLAST of TCONS_00049441-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERLN22.522e-16872.31Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1[more]
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