TCONS_00049477-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049477-protein
Unique NameTCONS_00049477-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length643

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049477-protein ID=TCONS_00049477-protein|Name=TCONS_00049477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
MDDSDEEIQPLKRKKKGSDTPIRTSRGIVKHSKLRAAKDCSTSISVKFKD
KSQKFPMSKKEIQLASQHPSSALKSKSEDSAKSSNGVSNNGESSSKSASA
SPQKTKMKNEVDSSSTKASFSSSYNKADQVFFKPRNLNDNGSQKTTLCPV
CNINLLFLHGVSPQFHINECLDRNPNFEEGYCSGDSSCSLSNVEHFRRHQ
HVPNIPVKTDDESSCSEQEIIIAEPTKRPVPQTPKEPSLLSNNQSPKSAK
KQTSINDFFGGKKKPQTPARKIFQKQNTDTPRVKASKTSNTERKPKNAPK
ECPFYKKIPGTNFTVDAFRYGDIKGCTCYFLTHFHSDHYGGLKKSFKGKL
YCSQITASLVTSQLRVSSACIHVLPMNKTVEVEGVKITLFDANHCPGAVM
FLMELPSPSKRILHVGDFRANLQMTEIPLIKSRPIDCLYLDTTYCKPEYS
FPPQNDVIEFVVKTARRYLKENPKTLIVCGTYSIGKEKVLQAIANEFDFK
VAVTPHKMKILKCLNDTSLNQRLTLDYDEANVHVLAMNKLSIKLLHEHLV
EHQQTRKWQRILAFKPTGWTFSGKLTSLDKIEPIIRPDVTIYGVPYSEHS
SFEELKSFVSALKPKKILATVGIGNKETRDRMNEYFTEWLKKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031391XLOC_031391Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049477TCONS_00049477Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR011084DRMBL
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 515..642
e-value: 0.023
score: 13.3
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 266..512
e-value: 3.8E-43
score: 146.9
IPR001279Metallo-beta-lactamasePFAMPF12706Lactamase_B_2coord: 330..449
e-value: 1.4E-6
score: 27.9
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 322..625
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 519..623
e-value: 3.1E-27
score: 94.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..120

Blast
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BLAST of TCONS_00049477-protein vs. Swiss-Prot (Human)
Match: DCR1A (DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3)

HSP 1 Score: 365.925 bits (938), Expect = 3.601e-114
Identity = 176/340 (51.76%), Postives = 229/340 (67.35%), Query Frame = 0 
Query:  300 KECPFYKKIPGTNFTVDAFRYGDIKGCTCYFLTHFHSDHYGGLKKSFKGKLYCSQITASLVTSQLRVSSACIHVLPMNKTVEVEGVKITLFDANHCPGAVMFLMELPSPSKRILHVGDFRANLQMTEIPLIKSRPIDCLYLDTTYCKPEYSFPPQNDVIEFVVKTARRYLKENPKTLIVCGTYSIGKEKVLQAIANEFDFKVAVTPHKMKILKCLNDTSLNQRLTLDYDEANVHVLAMNKLSIKLLHEHLVEHQQTRKWQRILAFKPTGWTFSGKLTSLDKIEPIIRPDVTIYGVPYSEHSSFEELKSFVSALKPKKILATVGIGNKETRDRMNEYFTEW 639
            K CPFYKKIPGT FTVDAF+YG ++GCT YFLTHFHSDHY GL K F   +YCS+IT +L+ ++L V    IH LP++    V GVK+ L DANHCPGAVM L  LP+ +  ILH GDFRA+  M E  L+  + +  LYLDTTYC PEY+FP Q +VI F + TA   +  NP  L+VCGTYSIGKEKV  AIA+    KV ++  K K L+CLN   +N  +T D   + VH+L M +++ K L  HL   +   K+ +ILAF+PTGWT S K T +  + P  + +++IYG+PYSEHSS+ E+K FV  LKP+KI+ TV +G  ++R  M +YF EW
Sbjct:  699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGT-VILHTGDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHL--KKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREW 1034
The following BLAST results are available for this feature:
BLAST of TCONS_00049477-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCR1A3.601e-11451.76DNA cross-link repair 1A protein OS=Homo sapiens G... [more]
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