TCONS_00049491-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049491-protein
Unique NameTCONS_00049491-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049491-protein ID=TCONS_00049491-protein|Name=TCONS_00049491-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1180bp
MWLYTLRHLSLTGIRKSSQFAGSKWLPRAFRHRTYINSPRDVVIYEHKKS
TAFNKLLTLVGVGQWFVTGYMSLVMFQSMPAFFSWIPIDESEKRKEGSTR
LPLADWKYRAGFSLFVIGTSTAMLVTICVLSLRSVTSITLMKNSSNVLIN
TITPVGTPFKTITPITEVSAIQQRTTQAGNIPLKLKNHRFHFLVDKSGHF
LQPTLFDRTTIYSKKMQNMNLSNEIKALCLLLLSKSNEENLKEVCIEIKN
TFFISKDTNQQKSFIIWLLKSWSFSSSNKHSQTFGFGCHGNLETQDVCQI
VEILEMEDDFVKVLFLLPESKKYKLVNHLCEKFNKAPQNHHQLRQAFIKY
TFTEYCPNFIASCTLNYCSKNVQLFFNNLTSTLELTANHDQGESIIYLLI
GLDCLLDDQEKNNTVKLDPYNTGSFIKRDILRIEQYKRSCASKLDSNISK
AVGQIKSSPNFDVTIERFVNTLITVLTSNDDLMVQNDHEQILVLVAMKLR
CFQQESESLFSDTIQSCLALLLRSYSGNEMELLTFICCEASSEEIGDLAT
TANETNLCYETWDKMANDVEEKLSLALHIVNQLFPGHQRVFQWLFTQTSD
KITDKEIWVRVCVTYVINHGSMEDLVTVVYSLIKNEHNLKVLFYCLDYLS
WSQINELLTQCRDLYKQQVSILPNCSAFYSRDQFKGDLNEVLNKVTEKDE
DLMYKLSTYFFFYPSHVCDQLLSRIFNGHMKATILEKLFHVFPTMLNTSF
VNKNNEPLNMLDAVQKMFIQHNEDIGQREDSEDVLAQLLYSTAKFSTEEN
GHAQRIVDEIIYPNICRANNDDELMLKMCFNTTMQLLHRVQQCNVIKLDQ
ILLLLEILFFYVNPSEDLENQEILQTFEMVQSVIKRFVVNIKWLYEKETD
EKIKSGIVLLITQLLSEQEAVMYYYFYQFFKSINDQDSAMKPPDSSILCA
ENHQGDRVTFLCHLFEVYTTSDEYIRDVMDKLPMINMQDEFDGIVEAISK
IFSRGGINKYKWTKHVDLISLLIRMNKIENVESVVPAHLLKEKSVHGCCI
SLNVLLEVFQKMKSADGKGTEQQLEEFPKLMDVLNKFLKTLDKFSILCAM
GIYIMRRIFEILEPLDEEIQQLFSLLLMDSLIITMKSCKVLPTQQRAVIL
EECREMFTELPEDSKLFSKLRNKFKGFDKA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031399XLOC_031399Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049491TCONS_00049491Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14640TMEM223coord: 40..209
e-value: 3.2E-29
score: 102.1

Blast
[Close]
BLAST of TCONS_00049491-protein vs. Swiss-Prot (Human)
Match: TM223 (Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.740e-16
Identity = 54/172 (31.40%), Postives = 78/172 (45.35%), Query Frame = 0 
Query:   40 RDVVIYEHKKSTAFNKLLTLVGVGQWFVTGYMSLVMFQSMPAFFSWIPID--ESEKRKEGSTRLPLADWKYRAGFSLFVIGTSTAMLVTICVLSLRSVTSITLMKNSSNVLINTITPVGTPFKTITPITEVSAIQQRTTQAGNIPLKLKNHRFHFLVDKSGHFLQPTLFDRT 209
            RDV+++EH +   F  +L L   GQ      M++      P     +P+   ++E    G   L  A W+Y        IG    +L    + SLRSV S+ L      V + T  P G       P+ +VS +  R      +PLK+K  RF+FL+DK+GHF    LFD T
Sbjct:   32 RDVLLFEHDRGRFFT-ILGLFCAGQGVFWASMAVAAVSRPP-----VPVQPLDAEVPNRGPFDLRSALWRYGLAVGCGAIGA--LVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNT 195
The following BLAST results are available for this feature:
BLAST of TCONS_00049491-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM2231.740e-1631.40Transmembrane protein 223 OS=Homo sapiens GN=TMEM2... [more]
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