TCONS_00049523-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049523-protein
Unique NameTCONS_00049523-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length285

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049523-protein ID=TCONS_00049523-protein|Name=TCONS_00049523-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
MSLQVLLPTGVTEHVECSILLSSHNLKINVEKITGIPYELQKIGYNGRYL
DNNRCLADQGVPPGAVLKLEVDMWWNKLISLALQGNTTSLGRRVSMPMQQ
IGAGNRILSTLLICATSGNPKGIDNMLVLHKDFDLASSTKVTGRTILHAA
VLSGSLKCVEEIKKYAGLKFEQLLYLKDKAGQTPLDGLSINDSRMLNYVN
KFLSSPINMDQLKNNENRDNRNKENTFIVEPSIREIKERNGVKQQEIEET
HIEDIPRLDRDKENTNPERVTNTVNQQXSFLQLSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031418XLOC_031418Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049523TCONS_00049523Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 73..226
e-value: 3.7E-6
score: 25.8
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 13..52
coord: 105..215
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 25..70
e-value: 3.5E-6
score: 26.5
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..73
score: 11.399
NoneNo IPR availableGENE3D3.10.20.90coord: 1..72
e-value: 3.1E-8
score: 32.8
NoneNo IPR availableCDDcd01769UBLcoord: 8..69
e-value: 1.83776E-6
score: 43.4098
NoneNo IPR availableCDDcd00204ANKcoord: 111..185
e-value: 9.24749E-5
score: 38.9039
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 1..72

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049523-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top