TCONS_00049548-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049548-protein
Unique NameTCONS_00049548-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length665

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049548-protein ID=TCONS_00049548-protein|Name=TCONS_00049548-protein|organism=Clytia hemisphaerica|type=polypeptide|length=665bp
MKKQLYRLKQQADQRVGRAEKTDLLTEDLQHVDKTVEKIKHACQTTSKKL
QACMQNKEGESERSRKKKLNQLLLGQGMVESSAVLGEGSIFGNVLMTSGE
AQTTIASELAICESEIDESVLAPVNKLLEIDLPSIANNKKKLNKARLDMD
SCKTRWNNAVKESQRASSNNKQDAVTKANALQSEYEDNTLLFHQLQDALA
TEMFTFVAGERSYAENVMKLLEAQRRYHKAAYEALEKCLPAVRETINDSM
FRPVFGCPLHDHLHVLKREIAMVLEECVLFILDHAMDAEGLFRLAGSASK
IKKLKAAFDAGVACVEEYSYEIHVVTGVLKLYLRELPDPILVKSLYDEWI
AASKIKDRDQRLQSLWTLVEKLPSENKVNLKYLICFLAKLAENSEVNKMT
PSNIAIVVGPNMLWNDNDGGVSIADTGNISIIVESLIEHSNWFFPEGCEF
KRHQLSDEQIDAISNRFTQREGEQSPEPLQHSISGGLFSEVSKKLGWNKD
GADITQANTTSNTNTAGSQATSSAAIGYYNPLAAQYDPDLDALYDSPPVP
PKPPSSNTGGGDDSMEFSRTMSTSSVGSNSEESNLSTPATPTHRRTPSGN
LPKRPAPPPPKGRPQTPGSPKTSSSPSLYPKLPSPPDHPAPPPPKPKLSA
LAKTTNIVDTLEKTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031425XLOC_031425Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049548TCONS_00049548Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004148BAR_dom
IPR000198RhoGAP_dom
IPR027267AH/BAR-dom
IPR008936Rho_GTPase_activation_prot
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004148BAR domainSMARTSM007215barcoord: 1..244
e-value: 9.0E-15
score: 65.1
IPR004148BAR domainPFAMPF03114BARcoord: 1..241
e-value: 9.8E-36
score: 123.5
IPR004148BAR domainPROSITEPS51021BARcoord: 14..251
score: 17.591
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 268..441
e-value: 4.0E-64
score: 229.0
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 272..417
e-value: 1.8E-45
score: 154.3
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 257..444
score: 43.811
NoneNo IPR availableGENE3D1.20.1270.60coord: 20..249
e-value: 9.2E-30
score: 103.5
NoneNo IPR availableGENE3D1.10.555.10coord: 250..462
e-value: 1.3E-60
score: 203.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..652
NoneNo IPR availableCDDcd07595BAR_RhoGAP_Rich-likecoord: 13..262
e-value: 1.00259E-79
score: 254.567
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 7..243
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 253..444

Blast
[Close]
BLAST of TCONS_00049548-protein vs. Swiss-Prot (Human)
Match: RHG44 (Rho GTPase-activating protein 44 OS=Homo sapiens GN=ARHGAP44 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 1.337e-125
Identity = 200/453 (44.15%), Postives = 290/453 (64.02%), Query Frame = 0 
Query:    1 MKKQLYRLKQQADQRVGRAEKTDLLTEDLQHVDKTVEKIKHACQTTSKKLQACMQNKEGESERSRKKKLNQLLLGQGMVESSAVLGEGSIFGNVLMTSGEAQTTIASELAICESEIDESVLAPVNKLLEIDLPSIANNKKKLNKARLDMDSCKTRWNNAVKESQRASSNNKQDAVTKANALQSEYEDNTLLFHQLQDALATEMFTFVAGERSYAENVMKLLEAQRRYHKAAYEALEKCLPAVRETINDSMFRPVFGCPLHDHLHVLKREIAMVLEECVLFILDHAMDAEGLFRLAGSASKIKKLKAAFDAGVACVEEYSYEIHVVTGVLKLYLRELPDPILVKSLYDEWIAASKIKDRDQRLQSLWTLVEKLPSENKVNLKYLICFLAKLAENSEVNKMTPSNIAIVVGPNMLWNDNDGGVS-IADTGNISI--IVESLIEHSNWFFPEGCEF 450
            MKKQ  R++Q A+Q VGRAEKT++L+EDL  V+K +E +K    +T KKL AC+Q ++G     R KKL    L Q ++E SA+LG+ ++ G +L   GE +  +A EL   E +++  V+ P+  L E+++P+I   +K L K  LDMDS +TRW    K S    S++ Q A  KA+AL+ E E+        +D L+ +M++FVA E  YA     L+E Q  YH+ +   L+  LP ++      + +P FG PL +HL +  REIA  +E CV  +L+  M  EGLFR+A SASK+KKLKAA D  V  V+EYS + H + G LK YLRELP+P++   LYDEWI AS ++++D++LQ+LW   EKLP  N  N++YLI FL+KL+E  +VNKMTPSN+AIV+GPN+LW   +G ++ +  T ++ I  I+E +I+H++WFFP   EF
Sbjct:    1 MKKQFNRMRQLANQTVGRAEKTEVLSEDLLQVEKRLELVKQVSHSTHKKLTACLQGQQGAEADKRSKKLPLTTLAQCLMEGSAILGDDTLLGKMLKLCGETEDKLAQELIHFELQVERDVIEPLFLLAEVEIPNIQKQRKHLAKLVLDMDSSRTRWQQTSKSS--GLSSSLQPAGAKADALREEMEEAANRVEICRDQLSADMYSFVAKEIDYANYFQTLIEVQAEYHRKSLTLLQAVLPQIKAQQEAWVEKPSFGKPLEEHLTISGREIAFPIEACVTMLLECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQEYSADPHAIAGALKSYLRELPEPLMTFELYDEWIQASNVQEQDKKLQALWNACEKLPKANHNNIRYLIKFLSKLSEYQDVNKMTPSNMAIVLGPNLLWPQAEGNITEMMTTVSLQIVGIIEPIIQHADWFFPGEIEF 451
The following BLAST results are available for this feature:
BLAST of TCONS_00049548-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG441.337e-12544.15Rho GTPase-activating protein 44 OS=Homo sapiens G... [more]
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