TCONS_00050291-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050291-protein
Unique NameTCONS_00050291-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050291-protein ID=TCONS_00050291-protein|Name=TCONS_00050291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MLPHPPSGSKKPKPLAHESKIKFPGTGKALKDPQKSDSRSFNSWREPSNE
MKKRATSKKKAEPPHREGSFSHYAPLPAIGAAHEEKQHLNGKRSLPKSAE
KQYPPNGDDNLLKTIKRMKLGMDDIMPEAPGTSSIQRAASHQAQYYISKH
QCYNIELMIRLPKGSKIQYTFKSTDTLETVLKYLSKEMKVALPLSKFVLY
LNQVPKIELNELKKTLFELGIFDRSVLTLDTRD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031848XLOC_031848Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050291TCONS_00050291Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001012UBX domainPFAMPF00789UBXcoord: 155..229
e-value: 1.7E-10
score: 40.8
IPR001012UBX domainPROSITEPS50033UBXcoord: 157..229
score: 13.189
NoneNo IPR availableGENE3D3.10.20.90coord: 15..229
e-value: 2.9E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..110
NoneNo IPR availableCDDcd00196UBQcoord: 159..229
e-value: 4.8606E-5
score: 38.6606
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 155..229

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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