TCONS_00050304-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050304-protein
Unique NameTCONS_00050304-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length833

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050304-protein ID=TCONS_00050304-protein|Name=TCONS_00050304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=833bp
MSDIKLLLNSYEDMDQDDDYNKYYESSMLDQTNPDDLLSPLEKLRKYCTS
ENIFTRQMVARSIIETVQSIQNAQECLSLLEVITKLSNDIEPSVRNELME
QLPPCSLMIMDMRLVPNAIADYILPVMVKYLTDSNNQVRKLTQNALLQLI
DQEMITRIEVERQICPVLLTLTEPDSGDDFRTEAVGLMTKITPLIGSENA
QHSFLRRFGDLCADPLFHVRKVCASNFGDMCSVLTQDTTEQQLLPLFARL
CEDGVWGVRKACAETFIAVSGSCSRQVRYDRLSPLFVGLLCDKSRWVQMA
AYTSLGQFISTFAEPERSGFDIDENGSLVRCPKTVLNTTTTISTAIDSVD
GRDSPSLPELEDPSSESDRLITSSVETTPSASSQNTTINHSVANDKKEEE
NTFNNFEYWRTPIPNFEIPDDLTVNNSTPETPENSTETENPSADTTTTTN
EELEDESQIMADSSTDENKESAEALEEQRADAVSPRPSVDTSHVDDFMHL
DPTGHSFHSDSDEDDSNLSMQQNTSNYASSIVDEESLHSQTVVPPALLEH
YISMTEASKVQTIDAELPRHCAYTLPGVVLALGADHWPLLKDTYELLSTD
MQWKVRRSLAFSIHDLALILGEEICVADLVSVFNGFLKDLDEVRIGVLKH
LYDFISLLPSELQKEYLQIFSEFRITDNMRNWRFREDLAQQLMNLSRLYT
YQELADHICPVALELACDNVAEVRQNSFHLISILIRRIAEEESNVEILGK
FVASITVLGAPTQHWVKRKACSQIYQHFVEGQWYDGTRFAEHFLPNLISL
CKDTVPNIRFIAAKALIAFMKTGTKLVSGFGFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031852XLOC_031852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050304TCONS_00050304Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR000357HEAT
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 30..825
e-value: 2.5E-65
score: 220.6
IPR000357HEAT repeatPFAMPF02985HEATcoord: 793..821
e-value: 0.0014
score: 18.6
coord: 243..269
e-value: 0.0014
score: 18.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..521
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 33..316
coord: 549..822

Blast
[Close]
BLAST of TCONS_00050304-protein vs. Swiss-Prot (Human)
Match: PP4R1 (Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Homo sapiens GN=PPP4R1 PE=1 SV=1)

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 354/917 (38.60%), Postives = 527/917 (57.47%), Query Frame = 0 
Query:    1 MSDIKLLLNSYEDMDQD------DDYNKYYE----SSMLDQTNPDDLLSPLEKLRKYCTSENIFTRQMVARSIIETVQSI-QNAQECLSLLEVITKLSNDIEPSVRNELMEQLPPCSLMIMDMR-LVPNAIADYILPVMVKYLTDSNNQVRKLTQNALLQLIDQEMITRIEVERQICPVLLTLTEPDSGDDFRTEAVGLMTKITPLIGSENAQHSFLRRFGDLCAD-PLFHVRKVCASNFGDMCSVLTQDTTEQQLLPLFARLCEDGVWGVRKACAETFIAVSGSCSRQVRYDRLSPLFVGLLCDKSRWVQMAAYTSLGQFISTFAEPERSG-----------FDIDENGSLVR---CPKTVL----NTTTTISTAIDSVDGRDSPSLPELEDPSSESDR---------LITSSVETTPSASSQNTTINHSVANDKKE---------------------EENTFNNFEYWRTPIPNFEIPDDLTVNNS---------------TPETP----------ENSTETENPSADTTTTTNEELEDESQIMADSSTDENKESAEALEEQRADA-----VSPRPSVDTSHVDDF-------MHLDPTGHSFHSDSDEDDSNLSMQQNTSNYASSIVDEESLHSQTVVPPALLEHYISMTEASKVQTIDAELPRHCAYTLPGVVLALGADHWPLLKDTYELLSTDMQWKVRRSLAFSIHDLALILGEEICVADLVSVFNGFLKDLDEVRIGVLKHLYDFISLLPSELQKEYLQIFSEFRITDNMRNWRFREDLAQQLMNLSRLYTYQELADHICPVALELACDNVAEVRQNSFHLISILIRRIAEEES---NVEILGKFVASITVLGAPTQHWVKRKACSQIYQHFVEGQWYDGTRFAEHFLPNLISLCKDTVPNIRFIAAKAL 816
            M+D+ LL    ED+ +D      DDY+   +     S LD  + D++L+PL +L KY  SENIF RQMVARS+++T++ +  + ++C+++LE I++L++D EP+VR ELMEQ+P  +L   + R  +P A + ++LP++V+YL D NNQVRK +Q ALL L++QE+I R +VE ++CPVL+ LT PDS DD +TEAV +M K+ P++G +  +   L RF ++C D  +FHVRKVCA+NFGD+CSV+ Q  TE+ LLP F +LC D VWGVRKACAE F+AVS +  +++R  +LS LF+ L+ D SRWV+ AA+ SLG FISTFA P  SG               EN +  R    P+ V     +T + +S +  SV   ++     +ED ++E+           L +S + T  S S Q    N    NDKK                      ++  +N+F +WRTP+P  ++  +L  N+                 P +P          E   E   P  D       ++E  S  +  SS D ++E+     E+R+D      ++  P+   +  D          ++D T H  HS              ++N + S  +E     Q VVP ALL+ Y+SMT+ S+ QT+D E+ +HCAY+LPGV L LG  +W  L++TYE L++DMQWKVRR+LAFSIH+LA+ILG+++  ADLV +FNGFLKDLDEVRIGVLKHL+DF+ LL  + ++EYL    EF +TDN RNWRFR +LA+QL+ L  LY+ +++ D++ P+AL L  D V+ VR  S+ L+S +++++         V+++ + V +          W  R+A   + Q  +E       +FA H +P+L++L  D VPN+R + AK L
Sbjct:    1 MADLSLL---QEDLQEDADGFGVDDYSSESDVIIIPSALDFVSQDEMLTPLGRLDKYAASENIFNRQMVARSLLDTLREVCDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIALFCQENRPSIPYAFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDVETKVCPVLIELTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFCEMCCDCRMFHVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLSALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTRDQEAPEDVQVRPEDTPSDLSVSNSSVILENT-----MEDHAAEASGKPLGEISVPLDSSLLCTLSSESHQEAASNE---NDKKPGNYKSMLRPEVGTTSQDSALLDQELYNSFHFWRTPLPEIDLDIELEQNSGGKPSPEGPEEESEGPVPSSPNITMATRKELEEMIENLEPHIDDPDV-KAQVEVLSAALRASSLDAHEETISI--EKRSDLQDELDINELPNCKINQEDSVPLISDAVENMDSTLHYIHS----------DSDLSNNSSFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKLHAATPPTFGVDLINELVENF----GRCPKWSGRQAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTL 889
The following BLAST results are available for this feature:
BLAST of TCONS_00050304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP4R10.000e+038.60Serine/threonine-protein phosphatase 4 regulatory ... [more]
back to top