TCONS_00050332-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050332-protein
Unique NameTCONS_00050332-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length310

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050332-protein ID=TCONS_00050332-protein|Name=TCONS_00050332-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MPSQEFNERISSFTASDFRADTITPLDELKELAQSKMKYKMELFVAHLQH
KVLSQLEKYEPEKKFLTDRWQREQGGGGITCILQDGKVFEKAGVNISVVH
GSMNPQQIQSMRARGKEIVDGENNFFATGISSVIHPRNPYIPTTHFNYRY
FELFDNEGNTTLWWFGGGTDLTPYYINEEDCRHFHQTQKEACDQHSKEYY
PKFKKWADDYFFIKFRGEHRGVGGTFFDDLDDGTMEDCFSFLTTCGYAIM
PSYLPIVDKHIDDEYGEKQLQWQYLRRGRYVEFNLVYDRGTKFGLYTPGS
RIESIXPGYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031864XLOC_031864Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050332TCONS_00050332Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001260Coprogen_oxidase_aer
Vocabulary: Molecular Function
TermDefinition
GO:0004109coproporphyrinogen oxidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006779 porphyrin-containing compound biosynthetic process
molecular_function GO:0004109 coproporphyrinogen oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001260Coproporphyrinogen III oxidase, aerobicPRINTSPR00073COPRGNOXDASEcoord: 63..79
score: 53.48
coord: 127..151
score: 70.91
coord: 80..101
score: 66.12
coord: 163..185
score: 75.1
coord: 200..229
score: 71.21
coord: 272..299
score: 82.14
IPR001260Coproporphyrinogen III oxidase, aerobicPIRSFPIRSF000166Coproporphyri_oxcoord: 5..307
e-value: 2.4E-121
score: 401.9
IPR001260Coproporphyrinogen III oxidase, aerobicGENE3D3.40.1500.10coord: 27..307
e-value: 1.3E-123
score: 411.1
IPR001260Coproporphyrinogen III oxidase, aerobicPFAMPF01218Coprogen_oxidascoord: 40..305
e-value: 5.2E-118
score: 393.0
IPR001260Coproporphyrinogen III oxidase, aerobicSUPERFAMILY102886Coproporphyrinogen III oxidasecoord: 33..305

Blast
[Close]
BLAST of TCONS_00050332-protein vs. Swiss-Prot (Human)
Match: HEM6 (Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3)

HSP 1 Score: 363.614 bits (932), Expect = 1.574e-124
Identity = 170/293 (58.02%), Postives = 214/293 (73.04%), Query Frame = 0 
Query:   15 ASDFRADTITPLDELKELAQSKMKYKMELFVAHLQHKVLSQLEKYEPEKKFLTDRWQREQGGGGITCILQDGKVFEKAGVNISVVHGSMNPQQIQSMRARGK--EIVDGENNFFATGISSVIHPRNPYIPTTHFNYRYFELFDNEGNTTLWWFGGGTDLTPYYINEEDCRHFHQTQKEACDQHSKEYYPKFKKWADDYFFIKFRGEHRGVGGTFFDDLDDGTMEDCFSFLTTCGYAIMPSYLPIVDKHIDDEYGEKQLQWQYLRRGRYVEFNLVYDRGTKFGLYTPGSRIESI 305
             S F A  +T L EL+      MK KMEL +   Q +V   L + +    F  DRW+R++GGGGI+C+LQDG VFEKAGV+ISVVHG+++ +  + MR+RGK  +  DG+  F A G+SSVIHP+NP+ PT HFNYRYFE+ + +GN   WWFGGG DLTP Y+N+ED  HFH+T KEACDQH  + YPKFKKW DDYFFI  RGE RG+GG FFDDLD  + E+ F F+ +C  A++PSY+P+V KH DD +  ++  WQ LRRGRYVEFNL+YDRGTKFGL+TPGSRIESI
Sbjct:  127 CSSFMAPPVTDLGELRRRP-GDMKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNKQ-WWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESI 417
The following BLAST results are available for this feature:
BLAST of TCONS_00050332-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEM61.574e-12458.02Oxygen-dependent coproporphyrinogen-III oxidase, m... [more]
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