Myophylin protein (polypeptide) - C. hemisphaerica

Overview
NameMyophylin protein
Unique NameTCONS_00050342-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050342-protein ID=TCONS_00050342-protein|Name=Myophylin protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MPSDKIVRPRGYGLTAQLKKKQDAKFDFDLAEDCLTWMKFVLNDGDFTAE
SSSLPDTISAQSDLMMPLKDGTILCKIMNVVKPGSVKKINTGKMAFKQME
NINNFLEGCESIGCKKLDLFQTVDLYEGQNLPQVINGILALGRKAQAIGY
DGPELGPTEATENKREFSEETLRAGQGIIGLQAGSNKGASQAGQNFGKTR
SIMD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031873XLOC_031873Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050342TCONS_00050342Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001997Calponin/LIMCH1
IPR001715CH-domain
IPR000557Calponin_repeat
Vocabulary: Biological Process
TermDefinition
GO:0031032actomyosin structure organization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031032 actomyosin structure organization
molecular_function GO:0003779 actin binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 167..180
score: 50.84
coord: 26..39
score: 21.85
coord: 134..148
score: 32.94
coord: 7..21
score: 36.08
coord: 113..128
score: 53.31
coord: 97..113
score: 44.64
coord: 180..195
score: 69.12
IPR001997Calponin/LIMCH1PRINTSPR00889CALPONINcoord: 75..92
score: 49.44
coord: 196..204
score: 15.0
coord: 127..142
score: 41.25
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 30..141
e-value: 2.7E-19
score: 80.1
IPR001715Calponin homology domainPFAMPF00307CHcoord: 31..146
e-value: 3.6E-21
score: 75.3
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 19..191
e-value: 3.2E-33
score: 114.0
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 28..145
score: 14.439
IPR001715Calponin homology domainCDDcd00014CHcoord: 32..146
e-value: 2.11663E-21
score: 84.2847
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 20..189
IPR000557Calponin repeatPFAMPF00402Calponincoord: 179..202
e-value: 5.0E-10
score: 38.8
IPR000557Calponin repeatPROSITEPS01052CALPONIN_1coord: 179..197
IPR000557Calponin repeatPROSITEPS51122CALPONIN_2coord: 179..203
score: 11.422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..204

Blast
[Close]
BLAST of Myophylin protein vs. Swiss-Prot (Human)
Match: TAGL3 (Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.825e-40
Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 0 
Query:   12 YGLTAQLKKKQDAKFDFDLAEDCLTWMKFVLNDGDFTAESSSLPDTISAQSDLMMPLKDGTILCKIMNVVKPG---SVKKINTGKMAFKQMENINNFLEGCESIGCKKLDLFQTVDLYEGQNLPQVINGILALGRKAQAIG---YDG-PELGPTEATENKREFSEETLRAGQGIIGLQAGSNKGASQAGQN-FGKTRSIM 203
            YGL+ ++++K + K+D DL    + W+  +L      AE    P     ++     L DGT+LCK++N + P     + KI+  KMAFKQME I+ FL+  E+ G +  D+FQTVDL+EG+++  V   ++ALG  A       Y G P     +A +N+R FSEE LR GQ +IGLQ GSNKGASQAG   +G  R IM
Sbjct:    8 YGLSREVQEKIEQKYDADLENKLVDWI--ILQ----CAEDIEHPP--PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGSNKGASQAGMTGYGMPRQIM 199
The following BLAST results are available for this feature:
BLAST of Myophylin protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL36.825e-4041.50Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2[more]
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