TCONS_00050354-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050354-protein
Unique Name	TCONS_00050354-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	769

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050354-protein ID=TCONS_00050354-protein|Name=TCONS_00050354-protein|organism=Clytia hemisphaerica|type=polypeptide|length=769bp
MDGSTSYLLICTVIHLFGCFCFFNGFLPNTNIISTKDFSQNTNLSKRSFR
KIDKLVFVLIDALRSDFILDGNHNMPFLQSLIKENQTFSYVSIASSPTVT
MPRIKAITSGTIPSFFEFFKNSASKEYTQDNFVQQFHNNNISMVFYGDNT
WTKLFPEKFLRSDGTNSFYVNDFYEVDNNVTRHLNPELTTLDWDSMILHY
LGLDHIGHTHGPFSPLIQQKLQEMDSIIQRIWLSVKKSNENTMIVITGDH
GMSNAGSHGGSSKEEINTPLIFLPTHLHGKPLYKENIRQIDIAVTFSVLF
GTEIPKQSIGVPAPFISSIYDFEEMARVKRKLACHFHTLSIPEKDLNELL
LDYCNGIHTDDQVIKKASDYLVMNSSSYNDLLMALGIIVIFLSCVLSLIY
CQRNLGVGDQNIDEQIKREDKNYTNGFIYFWLFIFQVSQTSSSFIEEEHY
LYYYALPSFIMLLIVCQSNILSTPIFILMLLLRLVKSWNQTGVNWIALED
IENYLNANNGSLAATILLGFVFLLLLKKKMMKEYLNIVILVLITSYKLCH
CKNYLDQLCNQQSQVSIVKVIYFVILLQTIKTKFQMQSMKTCFMFLALLF
LRPSNFPWFTLVVGVECILVEKIIPVMGKRPSYKQISFLLLTLTRFCHFA
QGNSNSFATVDISAGMIGLSEYHEIISIIITLIATYSSFLYIFFSMYICL
SNHAPTLMKSVGFTIWIYQMIEILLYSIVVFLMRYHLFIWSVFAPKYFYL
MVQALINFLFIIPCFVYRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031881	XLOC_031881	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050354	TCONS_00050354	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002591	Phosphodiest/P_Trfase
IPR017849	Alkaline_Pase-like_a/b/a
IPR017850	Alkaline_phosphatase_core

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002591	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	PFAM	PF01663	Phosphodiest	coord: 188..255 e-value: 4.3E-11 score: 42.9
IPR017849	Alkaline phosphatase-like, alpha/beta/alpha	GENE3D	3.40.720.10		coord: 43..307 e-value: 4.9E-48 score: 163.6
IPR017850	Alkaline-phosphatase-like, core domain	SUPERFAMILY	53649	Alkaline phosphatase-like	coord: 53..311

Blast

[Close]

BLAST of TCONS_00050354-protein vs. Swiss-Prot (Human)
Match: PIGG (GPI ethanolamine phosphate transferase 2 OS=Homo sapiens GN=PIGG PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 9.536e-80
Identity = 139/329 (42.25%), Postives = 193/329 (58.66%), Query Frame = 0

Query:    3 GSTSYLLICTVIHLFGCFCFFNGFLPNTNIISTK------------DFSQNTNLSKRSFRKIDKLVFVLIDALRSDFILD--GNHNMPFLQSLIKENQTFSYVSIASSPTVTMPRIKAITSGTIPSFFEFFKNSASKEYTQDNFVQQFHNNNISMVFYGDNTWTKLFPEKFLRSDGTNSFYVNDFYEVDNNVTRHLNPELTTLDWDSMILHYLGLDHIGHTHGPFSPLIQQKLQEMDSIIQRIWLSVKKSNENT----MIVITGDHGMSNAGSHGGSSKEEINTPLIFLPTHLHGKP---LYKENIRQIDIAVTFSVLFGTEIPKQSIG 310
            GS ++   C  I + G   F  GF P     S +                ++N +        K+V VLIDALR DF+    G   MP+   L+++  + S+V+ A  PTVTMPRIKA+ +G++P F +  +N  S    +D+ ++Q       +VFYGD TW KLFP+ F+  DGT SF+V+D+ EVDNNVTRHL+  L   DWD +ILHYLGLDHIGH  GP SPLI QKL EMDS++ +I  S++     T    ++V+ GDHGMS  GSHG SS EE+NTPLI + +    KP    + ++++Q D+A T ++  G  IPK S+G
Sbjct:    4 GSGTFATCCVAIEVLGIAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTLPPPLFSKVVIVLIDALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIKALMTGSLPGFVDVIRNLNSPALLEDSVIRQAKAAGKRIVFYGDETWVKLFPKHFVEYDGTTSFFVSDYTEVDNNVTRHLDKVLKRGDWDILILHYLGLDHIGHISGPNSPLIGQKLSEMDSVLMKIHTSLQSKERETPLPNLLVLCGDHGMSETGSHGASSTEEVNTPLILISSAFERKPGDIRHPKHVQQTDVAATLAIALGLPIPKDSVG 332

The following BLAST results are available for this feature:

BLAST of TCONS_00050354-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050354-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIGG	9.536e-80	42.25	GPI ethanolamine phosphate transferase 2 OS=Homo s...	[more]

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TCONS_00050354-protein (polypeptide) - C. hemisphaerica