TCONS_00050396-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050396-protein
Unique Name	TCONS_00050396-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	622

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050396-protein ID=TCONS_00050396-protein|Name=TCONS_00050396-protein|organism=Clytia hemisphaerica|type=polypeptide|length=622bp
MSTESHLTFKDFLSIYSDQLESIPNNYWPSLFQKLTQEIFDIGEYVSLCK
DEEEGWHVMVIAEDGLNKDDPNSVFLVDHAWTYEVKFAKKQLEQHDNLLN
RMKQLMDIDHSTEKEEAIEEVLQRMWKFNKCYHRKESMLLDGDDELNNNQ
MQKDRDYIPLWYVMDEVGSRVNHDDNPNFAFKPFYFLETDTTFTVIFPLQ
DLEYGEEVTRDYQSLYTDQALKDVMLYPWEEDRINLDEVHDDWIEKYTKE
LENTEEEQPLNCPNGLQIKTEPPYAVCTDSDYAKYLTNENFYLVDHEEKA
DIIYKQGHYRQMRKLLLEGRQYVLEQPNKNCLVLKNFLAETCQRHTVQKY
LGREMPQHIKERRGPIWLPTTFNLNTELPQFIKHFKERQAKGQYNVWIVK
PTNLARSLGIEVSDNLTQIIRLAEAGPRIVCEYISDISLFPREDTGLVKW
EIRHFAFVKSVEPLEVFVHNLPYVRFANKKFELNDFTDFQKHFTNMYYRH
RDKMLVFPWKEFYPEHYNKALPNVPYEKLEAEIFKMIKELFESATSRPPP
FGLGRSPQCRGYYAIDMILRWRDEEHTEIQPMLLESNFVPCMTRALEDDP
ELMNDIFGAFFLGTPPERMIRL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031909	XLOC_031909	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050396	TCONS_00050396	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam
IPR013815	ATP_grasp_subdomain_1
IPR001214	SET_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0005524	ATP binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..108
None	No IPR available	GENE3D	2.170.270.10		coord: 33..237 e-value: 4.2E-5 score: 22.9
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 114..216
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 321..617 e-value: 1.7E-43 score: 148.8
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PROSITE	PS51221	TTL	coord: 268..622 score: 29.727
IPR013815	ATP-grasp fold, subdomain 1	GENE3D	3.30.1490.20		coord: 354..435 e-value: 1.9E-11 score: 43.5
IPR001214	SET domain	PROSITE	PS50280	SET	coord: 44..213 score: 8.779

Blast

[Close]

BLAST of TCONS_00050396-protein vs. Swiss-Prot (Human)
Match: TTL12 (Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12 PE=1 SV=2)

HSP 1 Score: 395.971 bits (1016), Expect = 4.817e-130
Identity = 242/649 (37.29%), Postives = 345/649 (53.16%), Query Frame = 0

Query:    4 ESHLTFKDFLSIYSDQLES--IPNNYWPSLFQKLTQEIFDIGEYVSLCK----------------------DEEEGWHVMVIAEDGLNKDDPNSVFLVDHAWTYEVKFAKKQLEQHDNLLNRMKQLMDIDHSTE--KEEAIEEVLQRMWKFNKCYHRKESMLLDGDDELNNNQMQKDRDYIPLWYVMDEVGSRVNHDDNPNFAFKPFYFLETDTTFTVIFPLQDLEYGEEVTRDYQSLYTDQALKDVMLYPWE-EDRINLDEVHDDW-IEKYTKELENTEEEQPLNC-----PNGLQIKTEPPYAVCTD-SDYAKYLTNENFYLVDHEEKADIIYKQGHYRQMRKLLLEGRQYVLEQ-PNKNCLVLKNFLAETCQRHTVQKYLGREMPQHIKERRGPIWLPTTFNLNTELPQFIKHFKERQAKGQYNVWIVKPTNLARSLGIEVSDNLTQIIRLAEAGPRIVCEYISDISLFPREDTGLVKWEIRHFAFVKSVEPLEVFVHNLPYVRFANKKFELNDFTDFQKHFTNMYYRHRDKMLVFPWKEFYPEHYNKALPNVPYEKLEAEIFKMIKELFESATSRPPPFGLGRSPQCRGYYAIDMILRWRD--EEHTEIQPMLLESNFVPCMTRALEDDPELMNDIFGAFFLGTP 615
            E      +F +++   L +  +P  YW  L  KL  E+FD GE   + +                        E  + V+V  E GL    PNS+FL+DHAWT  V+ A++QL+Q   LL+RM  LM I+   E    EA+  VL+ MWKFN+ Y      L  G  E          + +P+WY+MDE GSR+ H D P+FA  PF+++     +T+++PL+DL+ GEEVTRD+    TD  ++  ML PW   D ++L     +   E Y   LE  +E+ PL+      P+G   K      V TD    A  LT+  F L   E  ADI++   H++  RKL  E    +L Q P +N L +K+ LA   +R       G E         GP WLP TFNL TELPQF+ +F++R+  G+ N WI KP NLARSL   V+ +L  IIR  E+ P++V +YI    LF RED G VK++IR+   ++SV PL +FV+++ ++RF+N+ F LND  D++KHFT M Y     +     +EF PE + K  P  P+  ++AEIF+   ELF+ A ++PPP GL   P  R  YA+D++L+W +  +    +QP +LE NF P   RA    P   ND+F   FL  P
Sbjct:   23 EGAQALAEFAALHGPALRASGVPERYWGRLLHKLEHEVFDAGEVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHPNSIFLIDHAWTCRVEHARQQLQQVPGLLHRMANLMGIEFHGELPSTEAVALVLEEMWKFNQTYQ-----LAHGTAE----------EKMPVWYIMDEFGSRIQHADVPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGETDPLIRKCMLLPWAPTDMLDLSSCTPEPPAEHYQAILEENKEKLPLDINPVVHPHGHIFK------VYTDVQQVASSLTHPRFTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRAG-----GPE---------GPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLDDYEKHFTVMNYDPDVVLKQVHCEEFIPE-FEKQYPEFPWTDVQAEIFRAFTELFQVACAKPPPLGLCDYPSSRAMYAVDLMLKWDNGPDGRRVMQPQILEVNFNPDCERACRYHPTFFNDVFSTLFLDQP 635

The following BLAST results are available for this feature:

BLAST of TCONS_00050396-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050396-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTL12	4.817e-130	37.29	Tubulin--tyrosine ligase-like protein 12 OS=Homo s...	[more]

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TCONS_00050396-protein (polypeptide) - C. hemisphaerica