TCONS_00050657-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050657-protein
Unique Name	TCONS_00050657-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	406

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050657-protein ID=TCONS_00050657-protein|Name=TCONS_00050657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MLRFLGKVENVVRFQKFCGLSWDENAASGVDWKQKKESKDSKRFSSTSSD
EGKDSAYNSHNSSEDSSSDHELPTDFKNTQPVKYTYNSFLHNIFFFGAEL
GNEIFYITFLPFVYWNVDDYIARRLIMLWVFNMYAGQGLKDVLCWPRPRS
PPVLRLETNYAAEYGMPSTHAIAGSIIPFGLVYFSYGRFEYPLLFGLLFF
VAWTSLVCLSRIYLGMHTFQDIVAGLSMAAFVTALWLPYLDGTLEIFLSS
ANAWIFIMLVPILMIYAFPTKSMVTRNDTATIIAVGCGCMLASWNEYYID
QIPLPNPYGEPVKLMFGTGFIAWILFSATRFIMGVAILISIKIIIKATMK
TIANFFESPEISNKKTTERGANQMFTLPYIFTCYGAIGYAAAYIAPKAFE
FVGLIH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032096	XLOC_032096	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050657	TCONS_00050657	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000326	P_Acid_Pase_2/haloperoxidase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	SMART	SM00014	acid_phosph_2	coord: 122..237 e-value: 2.5E-10 score: 50.3
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	GENE3D	1.20.144.10		coord: 25..241 e-value: 3.6E-20 score: 72.0
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	PFAM	PF01569	PAP2	coord: 131..237 e-value: 4.3E-14 score: 52.3
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	SUPERFAMILY	48317	Acid phosphatase/Vanadium-dependent haloperoxidase	coord: 86..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..73
None	No IPR available	CDD	cd03388	PAP2_SPPase1	coord: 89..237 e-value: 1.30738E-54 score: 178.578

Blast

[Close]

BLAST of TCONS_00050657-protein vs. Swiss-Prot (Human)
Match: SGPP2 (Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.092e-68
Identity = 136/415 (32.77%), Postives = 218/415 (52.53%), Query Frame = 0

Query:    1 MLRFLGKVENVVRFQKFCGL--SWDENA-ASGVDWKQKKESKDSKRFSSTSSDEGKDSAYNSHNSSEDSSSDHELPTDFKNTQPVKYTYNSFLHNIFFFGAELGNEIFYITFLPFVYWNVDDYIARRLIMLWVFNMYAGQGLKDVLCWPRPRSPPVLRLETNYAAEYGMPSTHAIAGSIIPFGLVYFSYGRFEYPLLFGLLFFVAWTSLVCLSRIYLGMHTFQDIVAGLSMAAFVTALWLP---YLDGTLEIFLSSANAW--IFIMLVPILMIYAFPTKSMV--TRNDTATIIAVGCGCMLASWNEYYIDQIPLPNPYGEPVKLMFGTGFIAWILFSATRFIMGVAILISIKIIIK-ATMKTIANFFESPEISNKKTTERGANQMFTLPYIFTCYGAIGYAAAYIAPKAFEFVGL 404
            +LR L   + V RFQ+ CGL  + DE    +G D  ++            ++ +G ++  N    +         P  +     VK   N F + +F F A LG E+FYITFLPF +WN+D Y++RRLI++WV  MY GQ  KDVL WPRP SPPV++LE    AEYGMPSTHA+A + I F L+  +  R++YP + GL+  V +++LVCLSR+Y GMHT  D++ G+ + A +  L  P   ++D      L SA+    + +++VP  + Y +P       TR DT TI+A G G  +  W  ++   +  P     PV           ++   T+F +G+ +++ ++ +++  +++ + ++F+   ++  K   R       +PY F  Y ++G  A    P    F+GL
Sbjct:    4 LLRSLQDSQLVARFQRRCGLFPAPDEGPRENGADPTERAARVPGVEHLPAANGKGGEAPANGLRRAAA-------PEAYVQKYVVK---NYFYYYLFQFSAALGQEVFYITFLPFTHWNIDPYLSRRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVKLEKRLIAEYGMPSTHAMAATAIAFTLLISTMDRYQYPFVLGLVMAVVFSTLVCLSRLYTGMHTVLDVLGGVLITALLIVLTYPAWTFIDC-----LDSASPLFPVCVIVVPFFLCYNYPVSDYYSPTRADTTTILAAGAGVTIGFWINHFFQLVSKPAE-SLPVIQNIPPLTTYMLVLGLTKFAVGIVLILLVRQLVQNLSLQVLYSWFKV--VTRNKEARRRLE--IEVPYKFVTYTSVGICATTFVPMLHRFLGL 398

The following BLAST results are available for this feature:

BLAST of TCONS_00050657-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SGPP2	1.092e-68	32.77	Sphingosine-1-phosphate phosphatase 2 OS=Homo sapi...	[more]

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TCONS_00050657-protein (polypeptide) - C. hemisphaerica