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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00050754-protein ID=TCONS_00050754-protein|Name=TCONS_00050754-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1773bp
MSLPVTSSNAGNTIAVGNLTDLAGILANLSPEQLQNIQLDPVLFEALSKN
IEPTTVVPQTVFHQPTADQQDLANALLNQQPLVNQEQPISSTELQNILIN
QQEALLTANALVNLQQGHEQTNVLVTEHDQPTNLLATQHQAQTLTTADAL
INLQQDHTLPTSTNEPVLINNEQPVTTDITSIAEDLLAEHQQRLLQKPSS
SADLPVSNIAISTPQTPIVNPASAVENMVLNPLQAPSSTQLPVENITINP
SSQVPLITNINGENIIINQQPMVTDIPLSTTANVQQISLANVLDPSATNL
NNINLVNLQPGQQIQATANLHPILQSAAATTNFQGIRPGESSSLILTPTV
MSQVQPTPTIQTINLTDGTVTTNLQPGAIESLIMTQPTFQPNTINILQEQ
MALQPTAVSLANLASAQQMPVSTTLLPSTITINPALLKRQNITIDPASLM
AQNLQIHQTVPQQPATVSSLLLDGNQLLDANNLIALSQVIVSGMSTQPVA
SLQQPLGQTVLSNQMMKTSSQIKFPATGFTPQKIMKMNKQQTSAGSPMKK
PKIQIVKNLSPDSPIFNQSKNSKSTASSTARNPNVTVKKISVSGKKSADA
IPVKPTSVEQVQPGVFKFQLKKVKSSEATALLSNNTITSKDGGKIETSLA
ELINSTKITDLQSKGRTAIKNTSTGQSQPGSQVSKTKPVTTANKPVTTAI
SVKLSNLPKDVLSKLKDLGKFSSIKISTSPSISSARCTQGVSTPDKDSVK
LNTTKSINKTNKANPNAADTAQSQAGALTTPRRVSIPTVSPALLRATLEA
KKLAATTKSAPSSATNNAQTPKNVNKVIPTKTTIPLTKTNGTPKTSQSTL
LQKPMNSPVSVTKNVQGKDVRMTPPGKTPQQSSSIQTQTKNLSSKTPQSV
VLQKSSTTSIAAGISESEMKDREKEIAFRLKRKLERQSSSSCSQDDGVEA
LSSSNSNIKNKNSNQLENVSINRPSTDLSRVLNAKTSSAGSQTTTKKISQ
TSISSPRSQPTKASTVAENIRKASRSNSKEVDDEDSLECEEKGFTSPESK
KTRSISPSRYIIDIKKLPKIPLKKSGVMEKANAVLQKAKSTGTSGKKTAN
AGAATGQKAEVESIRNAIESSRVGQPEVNMREMAKMEIEKQLKRMSDPKK
SSSSNKDDSSVPKSSKKLPTNSNESKKSITNSSDSKKAISNTAESNKQVI
NKSASETTEKRMDLKRKNDDSSTNTTDSETIKSPNEKKTKNEHSTATSSS
VKKSHKVGGARKKLNTLILDENRKRERPKKYDDFILAPEAKKSTPEKTKK
GTPEPKYSLPETKPAKKAKKFFFPKEAKSEPENRTESENDSDRKSGKPKN
DKVVPKEEKTESVDSKDNQIETEIEPVKSESECENDIIPEDKPDSNSKES
VLDNTDKVDNKNPESKSKSKVSPAVKSNKKPLQNNNKKKANTKSNAKSGT
KNKSKKRKQKTVAFEPEVLPEHLKTKSKPKTEDTVIDLSKVTLKSSFTET
SFILNDQIEANTYKHLNRKNWVCTLCGRPGNLGTLDVLFGPYKIKVKDSG
NKENGTQMNVWLHRDCAVWTSNICLSDQTLRGLGESLDEAALTKCCLCSK
VGATLQCGYKQCRDGYHFVCAKQRGCSFQMENFTITCPKHSKQKLITKKM
ADDTLDLWYFSYGSNMNQQRMTDRKVDFTDRQVAKLDGYKFKLNMSLGEG
FTAANICQMDDAHVYGVLYRCNEKGLSTLDTFEEVDNGLYERRKIQVELS
NGTKVEATTYVALVTDDSLRKCY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001965 | Zinc finger, PHD-type | SMART | SM00249 | PHD_3 | coord: 1594..1641
e-value: 5.2E-5
score: 32.7 |
| None | No IPR available | PFAM | PF13771 | zf-HC5HC2H | coord: 1563..1641
e-value: 9.9E-11
score: 41.6 |
| None | No IPR available | GENE3D | 3.10.490.10 | | coord: 1647..1770
e-value: 1.8E-21
score: 75.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 756..781 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 830..906 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 560..582 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1086..1482 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 933..1054 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 732..751 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 670..690 |
| IPR009288 | Gamma-glutamylcyclotransferase, AIG2-like | PFAM | PF06094 | GGACT | coord: 1659..1762
e-value: 2.3E-13
score: 50.7 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1588..1646
e-value: 0.0027
score: 17.0 |
| IPR034732 | Extended PHD (ePHD) domain | PROSITE | PS51805 | EPHD | coord: 1534..1641
score: 18.109 |
| IPR013024 | Gamma-glutamyl cyclotransferase-like | CDD | cd06661 | GGCT_like | coord: 1659..1762
e-value: 3.1702E-19
score: 84.7038 |
| IPR013024 | Gamma-glutamyl cyclotransferase-like | SUPERFAMILY | 110857 | Gamma-glutamyl cyclotransferase-like | coord: 1658..1764 |
Blast
BLAST of TCONS_00050754-protein vs. Swiss-Prot (Human)
Match: RAI1 (Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.442e-17 Identity = 37/96 (38.54%), Postives = 51/96 (53.12%), Query Frame = 0
Query: 1547 KDSGNKENGTQMNVWLHRDCAVWTSNICLSDQTLRGLGESLDEAALTKCCLCSKVGATLQCGYKQCRDGYHFVCAKQRGCSFQMENFTITCPKHSK 1642
K++ + G W+H CAVWT + L L GL E++ A C C + GAT+ C +K C YH+ CA GC F ENF++ CPKH +
Sbjct: 1809 KEAPAEPGGEAQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMMCSSCQEAGATIGCCHKGCLHTYHYPCASDAGCIFIEENFSLKCPKHKR 1904
The following BLAST results are available for this feature:
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