TCONS_00050757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050757-protein
Unique NameTCONS_00050757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length380

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050757-protein ID=TCONS_00050757-protein|Name=TCONS_00050757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MTTEETPSNISVQSTTTSTTFNDDYSHVNKRVDTSSSYWKKKFTLLSRKI
DNAEKQNLRLMNRLGQVKTISKRLSKEKRFLIKRLNKHGDKYKNIQFFQG
SGISDALNEAVINNSLPPPPPMKTKKVVKPSKSVAPPASAISIKAKRKYT
TGKQKYVGPKKPLNAFLWFCQEQREVILKERPGISHQELTKLIGTMWNSL
DEGEKEVYYDMFEKDKQRYQRELKEYNKVNKIKATSNTSKKSSSKASSTS
ASKAKAPSTLSSKKKTHEKGASSSLKIEMPGAEKEKKSPTKPSPTAVALQ
EDEHQKPKVKISLKLASKEPSLQPQQRIPSPEMITSHFDEEPDELVISEG
VDISASLRDDFEITSAIEKLNEDDEMDIDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032147XLOC_032147Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050757TCONS_00050757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableCDDcd00084HMG-boxcoord: 159..224
e-value: 3.47211E-20
score: 82.2815
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 158..228
e-value: 6.9E-28
score: 108.6
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 158..235
e-value: 3.0E-24
score: 84.8
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 159..227
e-value: 1.0E-22
score: 80.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 159..227
score: 19.773
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 158..234

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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