TCONS_00050765-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050765-protein
Unique NameTCONS_00050765-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050765-protein ID=TCONS_00050765-protein|Name=TCONS_00050765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MSFFWSKVSQVSSSFLSGIVLGLPIYITVNDYFFSIARVEGASMKPALNP
NGKKQSDFVFIDRWHTLPKDIQPGDIVALTSPTNHQVSFIKRVIGIEGEF
LNTPRYRLNSVMIPKGHFWVEGDNYRSSLDSNKFGPISMGLVKGKATHVI
WPPDRWSRLENEIPEKSPTERIDIRAHNRPKVIPKKIGVTIEIDQGDNED
SEIGNILSYDVEMALTEEPTINIDGAININEDEQEYIEAIEALEQYEKEE
KEKRKEADVVKDNETANE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032155XLOC_032155Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050765TCONS_00050765Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR015927Peptidase_S24_S26A/B/C
IPR019758Pept_S26A_signal_pept_1_CS
IPR019756Pept_S26A_signal_pept_1_Ser-AS
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0008236 serine-type peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..263
NoneNo IPR availableGENE3D2.10.109.10coord: 28..172
e-value: 1.4E-35
score: 121.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..268
NoneNo IPR availableCDDcd06530S26_SPase_Icoord: 35..146
e-value: 1.06371E-22
score: 88.4115
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 89..101
score: 42.12
coord: 113..132
score: 45.36
coord: 32..48
score: 30.81
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 38..104
e-value: 1.7E-6
score: 27.8
IPR015927Peptidase S24/S26A/S26B/S26CSUPERFAMILY51306LexA/Signal peptidasecoord: 32..159
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 118..131
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 41..48

Blast
[Close]
BLAST of TCONS_00050765-protein vs. Swiss-Prot (Human)
Match: IMP2L (Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens GN=IMMP2L PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.934e-50
Identity = 72/165 (43.64%), Postives = 108/165 (65.45%), Query Frame = 0 
Query:    8 VSQVSSSFLSGIVLGLPIYITVNDYFFSIARVEGASMKPALNPNGKKQSDFVFIDRWHTLPKDIQPGDIVALTSPTNHQVSFIKRVIGIEGEFLNTPRYRLNSVMIPKGHFWVEGDNYRSSLDSNKFGPISMGLVKGKATHVIWPPDRWSRLENEI-PEKSPTER 171
            V +   +F  G  + +P+ +T  D    +ARVEGASM+P+LNP G + SD V ++ W     ++  GDIV+L SP N +   IKRVI +EG+ + T  ++   V +P+GH WVEGD++  S DSN FGP+S+GL+   ATH++WPP+RW +LE+ + PE+ P +R
Sbjct:    8 VKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQR 172
The following BLAST results are available for this feature:
BLAST of TCONS_00050765-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMP2L4.934e-5043.64Mitochondrial inner membrane protease subunit 2 OS... [more]
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