TCONS_00050785-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050785-protein
Unique Name	TCONS_00050785-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	759

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050785-protein ID=TCONS_00050785-protein|Name=TCONS_00050785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=759bp
MADSRSNASRRDSENPDKSELDSSLSSRSPTETGSANIIFRSSELPHDSN
EFVLHSPNESDTDSRPSTQDNPPFSPFAYESCSQNSSRKGRRKKAVKKSQ
RRSSQEAERPISTVEEPLDKKESNVNLLERISSSDSNDESPEKISQEKIP
SCTEHHIRRLDKNHNNFKVTSLGVQTDWSWLRDRQKLKEEEVCQDDLTKV
MEMLKHGMHGGIISPTPAIIIKESHDNVVEDRRLISTKRNSSKAYRQDTK
RTGGSFSTSNNEHEPSKNSHQKLIKKPSRSLARSATKKRLNSVKSNRKIK
SATSTSRKSLAHNIDEETSDAASQAKKNNLTSQPELLKFHREKTLGENLP
SLEKADVSNSSDAMPSDGLFSGPCQFCGKPIMTVPPLEEFDEDDAELFCC
PEYKHFIKLHLQSVKDLADDGNEEEAELIDINPHAPYGNNKQSRKAPRDR
IVERMREREFERQRVATQANIFSFARQMKTIQYSLASTKCMAEGWTVNPK
PPVEQSSNRDEEIFQVEVNSTLLQRSEVLHTRLYENGKRFLTIFPDGTGC
CYYPNGNVAVMITSTEKEKYTYIVQSNEKYDDLEDSGLLAIFEPSGNAIC
YYEINQKIRLFINPHGGIELDKQGRRKKRWQWFYSKGQSQAPAFQPICIQ
LNKYLSLRLLNQNNMALIFSALKRSIRFNVGSNLMAHGLEGHGTFACDSS
EHYLSDKKKELSALLREIQNTLRFSKHAVVKSKLLRREFSSSESLPPITS
RSTDSVYVD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032169	XLOC_032169	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050785	TCONS_00050785	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029281	FAM194

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029281	FAM194 family	PFAM	PF14977	FAM194	coord: 531..728 e-value: 3.8E-52 score: 176.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..151

Blast

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BLAST of TCONS_00050785-protein vs. Swiss-Prot (Human)
Match: ERIP6 (Glutamate-rich protein 6 OS=Homo sapiens GN=ERICH6 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.249e-29
Identity = 87/319 (27.27%), Postives = 162/319 (50.78%), Query Frame = 0

Query:  374 CQFCGKPIMTV-PPLEEFDEDDAELFCCPEYKHFIK-LHLQSVKDLADDGNEEEAELIDINPHAPYGNNKQSRKAPRDRIVERMREREFERQRVATQANIFSFA----RQMKTIQYSLASTKCMAEGWTVNPKPPVEQSSNRDEEIFQVE--VNSTLLQRSEVLHTRLYENGKRFLTIFPDGTGCCYYPNGNVAVMITSTEKEKYTYIVQSNEKYDDLEDSGLLAIFEPSGNAICYYEINQKIRLFINPHGGIELDKQGRRKKRWQWFYSKGQSQAPAFQPICIQLNKYLSLRLLNQNNMALIFSALKRSIRFNVGSNL 684
            C+FCG  +      ++   E      CC  +++ I  ++ + +K         +AELI I+PHA +G+     KA +++ ++R +E+   R           F+    +++KTI Y L+    + E   ++      Q  N +  I   +  +    + R+E+L  + Y++G +FLT FPDGT   +YP+GN+A++    +   +T IVQ     D   +  +LA+ + SG + CY+  N  + ++IN  GG   D+ G R + W W  S   S   +F+P+ + LN+Y+ +R+L Q+ +++ F A+ +  R +VG+ +
Sbjct:  271 CEFCGSDLRAFFSNVDVSSEPKGHASCCIAFQNLIDYIYEEQIKT-----KPPKAELIAIDPHAAHGSEVDRLKA-KEKALQRKQEQRMARHFAIISREQTHFSEDDSKRLKTISYQLSVD--IPEKQIIDDIVFDFQLRNSNMSIICCDSRIACGKVVRNELLE-KHYKHGSKFLTSFPDGTTQIFYPSGNLAIIRVPNKVNGFTCIVQE----DMPTNPAILAVLDSSGRSSCYHP-NGNVWVYINILGGQYSDQAGNRIRAWNWSNSITSSPFVSFKPVFLALNRYIGVRILEQDKISITFLAMGQQARISVGTKV 575

The following BLAST results are available for this feature:

BLAST of TCONS_00050785-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050785-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ERIP6	4.249e-29	27.27	Glutamate-rich protein 6 OS=Homo sapiens GN=ERICH6...	[more]

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TCONS_00050785-protein (polypeptide) - C. hemisphaerica