TCONS_00050789-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050789-protein
Unique NameTCONS_00050789-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050789-protein ID=TCONS_00050789-protein|Name=TCONS_00050789-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
AKTKVQGKVIKMEDSHEDKVRINKNSIRMAGLESIRNFLKMSYEGVDFQL
AGNGGFDCYDYLTIQSRVTDTCVFVMLVFILIFPKIIRSLTLPKEWEIAK
FCQKPTAQRICGFRKFLLIALSIILGIELGYKISERSWIFLLNPCHVITI
LQIYLLSAEPGRMCTAVFRLHIHLLFGAFLAFVFPVLNTRVRHGEQMIYY
LQHFMITLVVPPYLIHTGGAYRCEPLRDFNWVLLAVVMFGFYMYFILQAT
SMYTLVNLNNMLCPAVSDPFAGRNYRWFAMFHQTALILIFGKTYTAILSL
FQRFLAYCKFKSSDPRRKLTKHVDKDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032170XLOC_032170Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050789TCONS_00050789Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026508TMEM164
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026508Transmembrane protein 164PFAMPF14808TMEM164coord: 40..296
e-value: 5.4E-91
score: 304.4

Blast
[Close]
BLAST of TCONS_00050789-protein vs. Swiss-Prot (Human)
Match: TM164 (Transmembrane protein 164 OS=Homo sapiens GN=TMEM164 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.461e-64
Identity = 111/266 (41.73%), Postives = 159/266 (59.77%), Query Frame = 0 
Query:   34 SIRNFLKMSYEGVDFQLAGNGGFDCYDYLTIQSRVTDTCVFVMLVFILIFPKIIRSLTLPKE-------WEIAKFCQKPTAQRICGFRKFLLIALSIILGIELGYKISERSWIFLLNPCHVITILQIYLLSAEPGRMCTAVFRLHIHLLFGAFLAFVFPVLNTRVRHGEQMIYYLQHFMITLVVPPYLIHTGGAYRCEPLRDFNWVLLAVVMFGFYMYFILQATSMYTLVNLNNMLCPAVSDPFAGRNYRWFAMFHQTALILIFGK 292
            S ++ L   Y GVD   AGNGG DC  +L+ Q R+ ++ V + L  + I   +   L   KE        +  +  Q+P   +    +  LL+AL +  G+E+G+K + ++ I+LLNPCH++T++ I+LL+  P R    VF+L +H+L GA LA +FPV+NTR+   E  IYY+QH M+  VVP YL+  GGAY  EPL  F W LL+  +  FY + +LQ   + T VNLNNMLCPA+SDPF G  YR +A  HQT + +  GK
Sbjct:    5 SYQSLLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILRQTKEDGRGSPGSQPEQVTQRPEEGKESLSKNLLLVALCLTFGVEVGFKFATKTVIYLLNPCHLVTMMHIFLLACPPCRGAIVVFKLQMHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLY-VVPIYLLWKGGAYTPEPLSSFRWALLSTGLMFFYHFSVLQILGLVTEVNLNNMLCPAISDPFYGPWYRIWASGHQTLMTMTHGK 269
The following BLAST results are available for this feature:
BLAST of TCONS_00050789-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1642.461e-6441.73Transmembrane protein 164 OS=Homo sapiens GN=TMEM1... [more]
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