TCONS_00050799-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050799-protein
Unique NameTCONS_00050799-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050799-protein ID=TCONS_00050799-protein|Name=TCONS_00050799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MQMVSAAKYSRAERELKPARVYGTGAKALFEKAELESDKTQPNHLIIAIS
SDRGLCGGIHSGISKAIRAKTADSGVDTKLIICGDKARSILQRTHSNDIL
FHMNELGRKPPLFEEASFVAEQVLDSGYEFDSGEMMFNKFNSVVSYSVTE
QDIFSFNSLSTAETMLQYDDVDEDVLRNYHEFSLANIVFYGMKESACSEQ
SARMTAMDNATKNAGDMIDRLRITYNRTRQAVITTELTEIISGCVALETA
D
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032180XLOC_032180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050799TCONS_00050799Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000131ATP_synth_F1_gsu
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000131ATP synthase, F1 complex, gamma subunitPRINTSPR00126ATPASEGAMMAcoord: 131..148
score: 29.33
coord: 225..246
score: 62.18
coord: 41..60
score: 42.8
coord: 194..213
score: 61.1
IPR000131ATP synthase, F1 complex, gamma subunitTIGRFAMTIGR01146TIGR01146coord: 1..247
e-value: 4.0E-70
score: 234.8
IPR000131ATP synthase, F1 complex, gamma subunitPFAMPF00231ATP-syntcoord: 1..247
e-value: 5.7E-68
score: 229.5
IPR000131ATP synthase, F1 complex, gamma subunitCDDcd12151F1-ATPase_gammacoord: 1..243
e-value: 3.54505E-86
score: 259.432
IPR000131ATP synthase, F1 complex, gamma subunitSUPERFAMILY52943ATP synthase (F1-ATPase), gamma subunitcoord: 1..247
NoneNo IPR availablePIRSFPIRSF039089ATP_synthase_gammacoord: 1..247
e-value: 1.6E-90
score: 301.2
NoneNo IPR availableGENE3D1.10.287.80coord: 200..242
e-value: 1.3E-15
score: 57.1
NoneNo IPR availableGENE3D3.40.1380.10coord: 4..199
e-value: 1.3E-47
score: 161.8

Blast
[Close]
BLAST of TCONS_00050799-protein vs. Swiss-Prot (Human)
Match: ATPG (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 1.554e-108
Identity = 145/251 (57.77%), Postives = 196/251 (78.09%), Query Frame = 0 
Query:    1 MQMVSAAKYSRAERELKPARVYGTGAKALFEKAELESDKTQPNHLIIAISSDRGLCGGIHSGISKAIRAKTAD---SGVDTKLIICGDKARSILQRTHSNDILFHMNELGRKPPLFEEASFVAEQVLDSGYEFDSGEMMFNKFNSVVSYSVTEQDIFSFNSLSTAETMLQYDDVDEDVLRNYHEFSLANIVFYGMKESACSEQSARMTAMDNATKNAGDMIDRLRITYNRTRQAVITTELTEIISGCVALE 248
            M+MV+AAKY+RAERELKPAR+YG G+ AL+EKA+++  + +  HL+I +SSDRGLCG IHS I+K ++++ A    +G +  L+  GDK R IL RTHS+  L    E+GRKPP F +AS +A ++L+SGYEFD G ++FNKF SV+SY   E+ IFS N++++A++M  YDD+D DVL+NY E++LANI++Y +KES  SEQSARMTAMDNA+KNA +MID+L +T+NRTRQAVIT EL EIISG  AL+
Sbjct:   48 MKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
The following BLAST results are available for this feature:
BLAST of TCONS_00050799-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATPG1.554e-10857.77ATP synthase subunit gamma, mitochondrial OS=Homo ... [more]
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