TCONS_00050810-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050810-protein
Unique NameTCONS_00050810-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050810-protein ID=TCONS_00050810-protein|Name=TCONS_00050810-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MVNYADMTSYDDVYYVPPQVKRETTKTTTSKSISTVREDDWKSLANSITY
LFHKKQLQKLELDILNEKVRNVHSHSSKKGETIVECYKDSILKKGMIVLR
EAIKEKKGNELLERLGDVWTSFYKNILPMLLAIFYPIQEQGTTIRAVTLI
GFRDMVLLKTKIADALEPGSKASPEIKQMLLVLASVHDGPPPSDNYLRLE
QLVARVISPYLGSKGLHTPQMSMSKRNSIDHKSSNGNGLRERKLSISKVL
KEEVTRKFRRSGSLTGQTNNTETNNNTSFKRRFKIGDNPPVQSQAVVPPV
VKTSLANDSSIEISKASEDSDMLAYLEERKQRWKNRDEMLGSESLLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032188XLOC_032188Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050810TCONS_00050810Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001373Cullin_N
IPR013745Bit61/PRR5
IPR016159Cullin_repeat-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0031625ubiquitin protein ligase binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0031625 ubiquitin protein ligase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 41..164
e-value: 4.8E-6
score: 25.4
IPR013745TORC2 component Bit61/PRR5PFAMPF08539HbrBcoord: 38..140
e-value: 1.0E-12
score: 48.3
NoneNo IPR availableGENE3D1.20.1310.10coord: 23..136
e-value: 1.6E-6
score: 27.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..276
IPR016159Cullin repeat-like-containing domainSUPERFAMILY74788Cullin repeat-likecoord: 38..163

Blast
[Close]
BLAST of TCONS_00050810-protein vs. Swiss-Prot (Human)
Match: PRR5L (Proline-rich protein 5-like OS=Homo sapiens GN=PRR5L PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 8.695e-41
Identity = 79/192 (41.15%), Postives = 117/192 (60.94%), Query Frame = 0 
Query:   41 WKSLANSITYLFHKKQLQKLELDILNEKVRNVHSHSSKKGETIVECYKDSILKKGMIVLREAIKEKKGNELLERLGDVWTSFYKNILPMLLAIFYPIQEQGTTIRAVTLIGFRDMVLLKTKIADALEPG-SKASPEIKQMLLVLASVHDGPPPSDNYLRLEQLVARVISPYLGSKG---LHTPQMSMSKRNS 228
            W S+  ++  +F    LQ  EL  LNE +R +    S+ G  I + +++ +L KG+  + E IK  +G   +E L +VW  F+   LP L AIFYP+Q Q  TIR ++L+GFRD+VLLK K+ D L    SK    I QMLL+L SVH+   PS++YL+LE+LV +V+SP+LG  G      P  ++++R+S
Sbjct:   53 WNSVQTAVINVFKGGGLQSNELYALNENIRRLLK--SELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHEPTGPSESYLQLEELVKQVVSPFLGISGDRSFSGPTYTLARRHS 242
The following BLAST results are available for this feature:
BLAST of TCONS_00050810-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRR5L8.695e-4141.15Proline-rich protein 5-like OS=Homo sapiens GN=PRR... [more]
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