TCONS_00050813-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050813-protein
Unique NameTCONS_00050813-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050813-protein ID=TCONS_00050813-protein|Name=TCONS_00050813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MSLKGFADKSKSGLKKRRELSEEQKQEIKEAFELFDTDKDNAIDYHELKV
AMRALGFDVKKADVLKILRDYDRDSTGQIHFDDFKEVTTDWMLDRDPQEE
IYKAFRLFDDDSTGKISVRNLRRVARELGENMTDDELRSMIDEFDKDGDG
EINENEFLSIMTGDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032191XLOC_032191Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050813TCONS_00050813Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableGENE3D1.10.238.10coord: 16..52
e-value: 7.3E-16
score: 57.3
NoneNo IPR availableGENE3D1.10.238.10coord: 53..76
e-value: 1.7E-12
score: 46.7
NoneNo IPR availableGENE3D1.10.238.10coord: 116..162
e-value: 4.8E-19
score: 67.7
NoneNo IPR availableGENE3D1.10.238.10coord: 77..115
e-value: 4.3E-15
score: 54.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR002048EF-hand domainSMARTSM00054efh_1coord: 100..128
e-value: 0.27
score: 20.3
coord: 27..55
e-value: 1.8E-7
score: 40.9
coord: 136..164
e-value: 9.7E-7
score: 38.4
coord: 63..91
e-value: 1.4
score: 16.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 99..161
e-value: 3.3E-15
score: 56.2
coord: 25..88
e-value: 1.6E-11
score: 44.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 23..58
score: 16.187
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 132..165
score: 14.932
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 12.254
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..94
score: 11.556
IPR002048EF-hand domainCDDcd00051EFhcoord: 100..162
e-value: 5.87222E-15
score: 64.8765
IPR002048EF-hand domainCDDcd00051EFhcoord: 27..86
e-value: 1.47495E-11
score: 55.2465
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 145..157
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 36..48
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 15..163

Blast
[Close]
BLAST of TCONS_00050813-protein vs. Swiss-Prot (Human)
Match: CETN3 (Centrin-3 OS=Homo sapiens GN=CETN3 PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 3.357e-89
Identity = 125/154 (81.17%), Postives = 144/154 (93.51%), Query Frame = 0 
Query:   11 KSGLKKRRELSEEQKQEIKEAFELFDTDKDNAIDYHELKVAMRALGFDVKKADVLKILRDYDRDSTGQIHFDDFKEVTTDWMLDRDPQEEIYKAFRLFDDDSTGKISVRNLRRVARELGENMTDDELRSMIDEFDKDGDGEINENEFLSIMTGD 164
            K+  KKRRELSEEQKQEIK+AFELFDTDKD AIDYHELKVAMRALGFDVKKADVLKIL+DYDR++TG+I F+DF EV TDW+L+RDP EEI KAF+LFDDD +GKIS+RNLRRVARELGENM+D+ELR+MI+EFDKDGDGEIN+ EF++IMTGD
Sbjct:   13 KTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGD 166
The following BLAST results are available for this feature:
BLAST of TCONS_00050813-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CETN33.357e-8981.17Centrin-3 OS=Homo sapiens GN=CETN3 PE=1 SV=2[more]
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