TCONS_00050855-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050855-protein
Unique NameTCONS_00050855-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050855-protein ID=TCONS_00050855-protein|Name=TCONS_00050855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MASRADREATQLSKTLSYLLRHGSKEHRLKMDTNGFSKLDDVIKTIRKML
PKQTITTPRIEDIVKNCKKQRFKIVEIDGVKFIRANQGHTLKDVESADLK
VIEHFEDGPSGKIIHGTTQQAWQFIKSSGLNKMKRNHIHMARGNFGEAKS
GARSSSNIIITINGNQALKDGIKFFESDNGVILSPGNDNGTIETEYFVDV
YDRQLGKQIFP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032225XLOC_032225Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050855TCONS_00050855Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002745Ptrans_KptA/Tpt1
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Molecular Function
TermDefinition
GO:0016772transferase activity, transferring phosphorus-containing groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002745Phosphotransferase KptA/Tpt1PFAMPF01885PTS_2-RNAcoord: 9..186
e-value: 2.2E-53
score: 180.9
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 11..197

Blast
[Close]
BLAST of TCONS_00050855-protein vs. Swiss-Prot (Human)
Match: TRPT1 (tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TRPT1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.352e-34
Identity = 78/197 (39.59%), Postives = 110/197 (55.84%), Query Frame = 0 
Query:    6 DREATQLSKTLSYLLRHGSKEHRLKMDTNGFSKLDDVIKTIRKMLPK-QTITTPRIEDIVKNCKKQRFKIVEIDGVK--FIRANQGHTLKDVESADLKVIEHFEDGPSGKIIHGTTQQAWQFIKSSGLNKMKRNHIHMARGNFGEAK--SGARSSSNIIITINGNQALKDGIKFFESDNGVILSPGNDNGTIETEYF 197
            DR+  QLSK LSY LRHG+ +  L M  +GF  L  +++     LP+ +  +   ++ +V   +KQRF +   D      IRANQGH+L+ V   +L  +E  +  P   ++HGT  + W  I   GL+   R HIH+A G  G+    SG RS   I + I+G  AL DGI FF S NGVIL+PGN +G +  +YF
Sbjct:   26 DRD-VQLSKALSYALRHGALKLGLPMGADGFVPLGTLLQ-----LPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHSLQ-VPKLELMPLETPQALPP-MLVHGTFWKHWPSILLKGLSCQGRTHIHLAPGLPGDPGIISGMRSHCEIAVFIDGPLALADGIPFFRSANGVILTPGNTDGFLLPKYF 214
The following BLAST results are available for this feature:
BLAST of TCONS_00050855-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPT17.352e-3439.59tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TR... [more]
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