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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00050882-protein ID=TCONS_00050882-protein|Name=TCONS_00050882-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MAQVFLVMASKWWESGDYANALIWYETLLQYYQAEKDDDVTNQIWETKYM
IGKCLYQCGRHDEALQIFQKTLISLRQTYSADHDEVLEVLNEIALCYCGK
GEHPKALEIYQDIEKVDQRKRKYDKDTLVTRSSIAMCYSNMDRLVESKQI
YEEVLAEQIKMLGPDHSHVMYTKTNLATCLQRMGKSQQAFEIYQNSTLKT
PFGNEHLASIQNKSNQIGCLIDQGRLEDALNMSFDVQRSIEKKYSRKHPT
WTNARLELAKILVQSKKFDEAILVTLEVKSIYMETKGEDHQDMLQIVNLL
AACYSGKDDYQEALRIQQESLKKFPNADIRSSATLRNNIARTLFDLGRPQ
DGLTIIDDVDRQMTKLLGEKHPDSILVKKNKAKLLLESDLHQDAAHCFRE
VELLYKVTCNMKSLLEVRKELMICFLEMNDLNQCLEVYSHLRDQMDDDYE
LCSIKNKLALKLADTDNYKRQAVKIFKEVERIMEETVKLPATNPALLNTK
LNIATCLEELGDQQEADLYFKHIQNIKPGYSG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 87..120
e-value: 9.8
score: 15.0
coord: 45..78
e-value: 5.6
score: 15.9
coord: 497..530
e-value: 46.0
score: 9.1
coord: 294..327
e-value: 27.0
score: 11.2
coord: 170..203
e-value: 160.0
score: 4.4
coord: 128..161
e-value: 120.0
score: 5.6
coord: 2..35
e-value: 82.0
score: 6.9 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 51..115
e-value: 2.7E-12
score: 46.7
coord: 256..322
e-value: 1.4E-7
score: 31.6
coord: 128..194
e-value: 2.8E-7
score: 30.6 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 333..373
e-value: 0.0077
score: 16.0 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 211..272
e-value: 0.0048
score: 16.3 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 314..391
e-value: 1.7E-6
score: 27.3 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 392..529
e-value: 7.8E-8
score: 31.8 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 1..60
e-value: 4.0E-8
score: 32.6 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 61..124
e-value: 1.2E-8
score: 34.4 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 14..72 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 480..530
coord: 296..451 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 250..326
coord: 62..201 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 125..149
e-value: 0.073
score: 12.9
coord: 150..206
e-value: 2.4E-10
score: 40.0
coord: 273..313
e-value: 3.1E-6
score: 26.9 |
Blast
The following BLAST results are available for this feature:
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