TCONS_00050906-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050906-protein
Unique Name	TCONS_00050906-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	865

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050906-protein ID=TCONS_00050906-protein|Name=TCONS_00050906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=865bp
MKKESTLFRSEEMKLCQLYLQTESAYGCVSELGEIGLVEFRDLNPNVNAF
QRKFVAEVRRCDEMERKLRFMLKEIDKAEILVQDNGENPEAPHPNEMMEL
EDKLEQLEKEMKESNINYEQLQKTFMELNELKCILRKTQSFFEEAEHQLF
HDPVTGSDSKRADDDDDELSLLAETGYATPALGGRLGFVAGVIQREKVPG
FERLLWRACRGNVFFKHTPIDEQLYDPSTGDVTYKSVFIIFFQGDQLKSR
VKKICEGFKATLYPCPETSAERREMVIGVATRIEDVQAVLNQTQDHRHRL
LQTIAKNMNDWLIKVKKIKAIYHTMNMFNIDVTSKALIAECWAPVADLDH
IHHALDEGTRKSGSAVPSIIHQMKTRETPPTFNRTNKFTNGFQAIIDAYG
VADYQEVNPSLYAIITFPFLFSVMFGDFGHGIIMSVFAYWMIKMERKLNN
WKGGGEMFDMIFSGRYVILLMGLFSIYSGLIYNDIFSKSLRFFDSPWTHL
NVTKETDYKYNIHKMEKLANSTDLFMFNPLDVESKTPYLFGLDPIWQLAT
NKLTFTNSLKMKLSVIFGVTHMTFGVILGLLNHWHFKDPLKIWFEFVPQL
LFISCIFGYLVIVIFYKWVAFDIHSQYQPSILLGLIGMFLHFGAEIKEED
LLYSGQQGLQPFLVVVAVLSVPVMLLGRPLILRYRNKNGHLESPRYQKLD
QDDDVHGNGGHVEIMHNDTSILGDDGFAEADDDVKEEPFDFGEIFITQAI
HTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWSMVFKMGLGMNGGIGS
IAIFLFFGAWAALTIGILLIMEGLSAFLHTLRLHWVEFNGKFYHGTGIKF
APFCFKTILKDAEDV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032264	XLOC_032264	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050906	TCONS_00050906	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002490	V-ATPase_116kDa_su
IPR026028	V-type_ATPase_116kDa_su_euka

Vocabulary: **Molecular Function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0033179	proton-transporting V-type ATPase, V0 domain
GO:0000220	vacuolar proton-transporting V-type ATPase, V0 domain

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0000220	vacuolar proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	hydrogen ion transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	COILS	Coil	Coil	coord: 97..131
None	No IPR available	GENE3D	1.20.5.340		coord: 38..317 e-value: 5.2E-4 score: 19.3
IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	PFAM	PF01496	V_ATPase_I	coord: 30..855 e-value: 0.0 score: 1085.9
IPR026028	ATPase, V0 complex, subunit 116kDa, eukaryotic	PIRSF	PIRSF001293	ATP6V0A1	coord: 3..864 e-value: 0.0 score: 1022.5

Blast

[Close]

BLAST of TCONS_00050906-protein vs. Swiss-Prot (Human)
Match: VPP1 (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3)

HSP 1 Score: 958.362 bits (2476), Expect = 0.000e+0
Identity = 499/862 (57.89%), Postives = 609/862 (70.65%), Query Frame = 0

Query:    7 LFRSEEMKLCQLYLQTESAYGCVSELGEIGLVEFRDLNPNVNAFQRKFVAEVRRCDEMERKLRFMLKEIDKAEILVQDNGENPEAPHPNEMMELEDKLEQLEKEMKESNINYEQLQKTFMELNELKCILRKTQSFFEEAEHQLFHDPVTGSDSKRADDDDDELSLLAET----GYATPALGGRLGFVAGVIQREKVPGFERLLWRACRGNVFFKHTPIDEQLYDPSTGDVTYKSVFIIFFQGDQLKSRVKKICEGFKATLYPCPETSAERREMVIGVATRIEDVQAVLNQTQDHRHRLLQTIAKNMNDWLIKVKKIKAIYHTMNMFNIDVTSKALIAECWAPVADLDHIHHALDEGTRKSGSAVPSIIHQMKTRETPPTFNRTNKFTNGFQAIIDAYGVADYQEVNPSLYAIITFPFLFSVMFGDFGHGIIMSVFAYWMIKMERKLNNWKGGGEMFDMIFSGRYVILLMGLFSIYSGLIYNDIFSKSLRFFDSPWTHLNVTKETDYKYNIHKMEKLANSTDLFMFNP-LDVESKTPYLFGLDPIWQLATNKLTFTNSLKMKLSVIFGVTHMTFGVILGLLNHWHFKDPLKIWFEFVPQLLFISCIFGYLVIVIFYKWVAFDIH-SQYQPSILLGLIGMFLHFGAEIKEEDLLYSGQQGLQPFLVVVAVLSVPVMLLGRPLILRYRNKNGHLESPRYQKLDQDDDVHGNGGHVE----IMHNDTSILGDDGFAEADDDVKEEPFDFGEIFITQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWSMVFKMGLGMNGGIGSIAIFLFFGAWAALTIGILLIMEGLSAFLHTLRLHWVEFNGKFYHGTGIKFAPFCFKTI 858
            LFRSEEM L QL+LQ+E+AY CVSELGE+G V+FRDLNP+VN FQRKFV EVRRC+EM+RKLRF+ KEI KA I + D GENPE P P +M++LE   E++E E+KE N N E L++ F+EL ELK ILRKTQ FF+E                 AD D  E S         G  TP    RLGFVAGVI RE++P FER+LWR CRGNVF +   I+  L DP TGD  +KSVFIIFFQGDQLK+RVKKICEGF+A+LYPCPET  ER+EM  GV TRI+D+Q VLNQT+DHR R+LQ  AKN+  W IKV+K+KAIYHT+N+ NIDVT K LIAE W PV DLD I  AL  GT  SGS VPSI+++M+T +TPPT+N+TNKFT GFQ I+DAYG+  Y+E+NP+ Y IITFPFLF+VMFGDFGHGI+M++FA WM+  E ++ + K   EMF  +FSGRY+ILLMG+FS+Y+GLIYND FSKSL  F S W+   V     Y +     E+      +   NP L      PY FG+DPIW +ATNKLTF NS KMK+SVI G+ HM FGV L L NH +FK PL I+F F+P+++F++ +FGYLVI+IFYKW A+D H S+  PS+L+  I MFL F        +LYSGQ+G+Q FLVVVA+L VP MLL +PL+LR +    +L       L+      GNG   E    I H+  S   +D    AD+  ++E FDFG+  + QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLW+MV  +GL +    G + +F FF A+A LT+ ILLIMEGLSAFLH LRLHWVEF  KFY GTG KF PF F+ I
Sbjct:    4 LFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEM----------------ADPDLLEESSSLLEPSEMGRGTPL---RLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMYTGLIYNDCFSKSLNIFGSSWS---VRPMFTYNWT----EETLRGNPVLQLNPALPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEIIFMTSLFGYLVILIFYKWTAYDAHTSENAPSLLIHFINMFL-FSYPESGYSMLYSGQKGIQCFLVVVALLCVPWMLLFKPLVLRRQ----YLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSED----ADEPSEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHI 830

The following BLAST results are available for this feature:

BLAST of TCONS_00050906-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050906-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VPP1	0.000e+0	57.89	V-type proton ATPase 116 kDa subunit a isoform 1 O...	[more]

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TCONS_00050906-protein (polypeptide) - C. hemisphaerica