TCONS_00050946-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050946-protein
Unique NameTCONS_00050946-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050946-protein ID=TCONS_00050946-protein|Name=TCONS_00050946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MGRNSNKNVRKSGYIFEYRFTLLGGAKTGKTSVLNRFISDTFTHRYRPTI
EDHITHTIDHKGNICVCLFVDTCGGNDFPAMKRLAITKGNAFLLLYSIDN
RKSFQEAKRTAEEIISLKDTSEDVKIMLIANKTDLDDRREVSKQEGLDLV
DDLNTGNVSSMFFEVSAFTGNGIKDIFTELLQLFIPETPDVVITTEKSAF
SRMSFRRRSKKKQLRKQKNLESINNNDSNYFSDTEVEPMSKNLQTPEHGQ
LVRSSSATSHITDSDSGMESSPNTSPTFGRKDGASPTRRESSAKEILRKT
FGSMQRIFVNKHEQNNNSPHLVRSGTVESIRSLSMTRNKQTSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032287XLOC_032287Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050946TCONS_00050946Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 18..39
score: 29.81
coord: 162..184
score: 28.5
coord: 122..135
score: 43.62
coord: 41..57
score: 26.57
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 20..187
e-value: 3.1E-8
score: -12.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..187
e-value: 2.1E-11
score: 32.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 15..187
e-value: 1.3E-34
score: 131.0
NoneNo IPR availableGENE3D3.40.50.300coord: 81..185
e-value: 5.8E-22
score: 77.1
NoneNo IPR availableGENE3D3.30.70.1390coord: 16..80
e-value: 1.2E-9
score: 37.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..296
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 20..182
e-value: 2.7E-35
score: 121.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..179
e-value: 3.0E-20
score: 70.6
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 7..224
score: 18.327
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..193

Blast
BLAST of TCONS_00050946-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.362e-35
Identity = 65/167 (38.92%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   17 EYRFTLLGGAKTGKTSVLNRFISDTFTHRYRPTIEDHITHTIDHKGNICVCLFVDTCGGNDFPAMKRLAITKGNAFLLLYSIDNRKSFQEAKRTAEEIISLKDTSEDVKIMLIANKTDLDDRREVSKQEGLDLVDDLNTGNVSSMFFEVSAFTGNGIKDIFTELLQL 183
            +YR  + G    GK+S++ RF+  TF   Y PT+ED     I    +IC     DT G + FPAM+RL+I+KG+AF+L+YSI +R+S +E K   E+I  +K   E + IML+ NK D    REV   E   L            F E SA   + +K++F ELL L
Sbjct:    7 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCA-----FMETSAKLNHNVKELFQELLNL 168          
The following BLAST results are available for this feature:
BLAST of TCONS_00050946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA25.362e-3538.92GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
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