TCONS_00050948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050948-protein
Unique NameTCONS_00050948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length560

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050948-protein ID=TCONS_00050948-protein|Name=TCONS_00050948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=560bp
ACVKLGIIPEGFPKIGSADISIIEHTKSPCGCPTRTLPPGRPDKLPFEAT
PENNSKMREWLINRYAASTFNKCPHQQLPGMSGPEIRLHVNPNATPTAIH
KPIPVPLHWQAEVEQQIRDDVALGVLEEVPMGETSEWCHRMVIVRKPDGK
PRRTVDLSPLNKHCLRETHHVQPPFQQAKSIPPMTWKTVTDAWNGYHSVP
IHPDDRHLTTFLTPWGRFRYRTAPQGFLASGDGYARRFDEIIKDVPRKTK
CVDDTAMWDNELSDHWWRVIDFLDLLGKNGIVLNESKFQFAGREVQFAGF
HVTEREIRPLEKFLRAIRDFPTPTKLSDVRSWFGLVNQVGHYAQLIEIMA
PFKHLLSPKSKFAWSDELESAFQSSKNLIIDAIKRGVEIFDMEKLTCLRP
DWSKIGIGFYLCQKHCNCTSITPDCCEDGWKITLAGSRFLKPAETRYAPV
EGEALAIAYSLKQTKFFTLGCDRLIVVTDHEPLTKVLGDRTLDEISNTRL
FKLKQRTLPWRFIIKHLPGKSNHFANATSRSPVNNPEDDDDLLDDEDDID
TELQPSTFQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032289XLOC_032289Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050948TCONS_00050948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 221..306
e-value: 3.9E-10
score: 39.2
NoneNo IPR availableGENE3D3.30.70.270coord: 307..421
e-value: 3.7E-14
score: 52.2
NoneNo IPR availableGENE3D3.10.10.10coord: 84..220
e-value: 5.0E-25
score: 87.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 524..560
NoneNo IPR availableCDDcd01647RT_LTRcoord: 124..302
e-value: 1.20147E-29
score: 113.844
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 84..522
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 156..302
e-value: 3.8E-7
score: 29.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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