TCONS_00050963-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050963-protein
Unique NameTCONS_00050963-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length289

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050963-protein ID=TCONS_00050963-protein|Name=TCONS_00050963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
STVCSQDSQDSQASQESVIDTMGNRLLRDFARENRASIEEAPVDEEVLYS
GGDDFDWHQNGLRWLGVQSFSEEQMNDTKNWLSDVSKQATEAYEREGRLC
NLPEVDPKLVNHIQMLIVYYNIKTLLEYARGNFNVGYDNCKRLIIQGCAG
TGKSQVVKIITRLVRRIFQCNRAVLNVAPTSAAGLLLPGGGTIHSCVNIP
RKTKEKFTLADRPMSAEQSGLLKKLTLDNDNSKLSLMCLNADERGMVGQY
VLAWFHHRFSEMSSNLLNTESDVPFGCIPTFNFLVIYFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032304XLOC_032304Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050963TCONS_00050963Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
molecular_function GO:0003678 DNA helicase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 139..224
e-value: 2.5E-10
score: 40.0
NoneNo IPR availableGENE3D3.40.50.300coord: 135..184
e-value: 1.5E-4
score: 20.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050963-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top