TCONS_00050995-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050995-protein
Unique NameTCONS_00050995-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length675

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050995-protein ID=TCONS_00050995-protein|Name=TCONS_00050995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MVETADLDQLELDSTIGFAGNVPGGLLAHPNKKHLIYPLGNTIVVKNIAT
GSQKFLSGHTDNVSCVALSKSGQYVASGQSTYMGFKADVIVWDFESMSLY
CRLVLHKVKVEALAFSPNEQYLATLGGQDDGSVVIWDLPRKEAVCGSPAA
VPSAGTTYCVAFANNNNNIFVTGGNKTLRVWDLDSENRIIRPTDCNMGQL
KRIVKCIQVSDDDKHIYCGTTSGDILQINLNTKLLCHYGPAKEKFSLGVL
SLSLVEQNILIGAGDGTVAKVRVDGFKKLKSKKVDGEVTSITAPAGNLEK
FFVGTQLSQIYQFNFSTFVEETISTCHYSSVKDISFPYNYSDVFATCSKN
DIRVWNAKSSKELLRVVVPNMTCNAVDFFRDGKSIISAWDDGKIRVFTPE
SGKLRFIIHDAHNKGVTAIASTSTSKRIXETGIPVVFSCKTLYLFLAWDD
GKIRVFTPESGKLRFIIHDAHNKGVTAIASTSTSKRIISGGGEGEVRVWD
VNDKEYQMTRAMKEHKGAVTCIKVRSKDQQCVTSSTDGTCIIWDLERYVR
NQIIFANTMFKVVCYRPDESQIITSGTDKNIGYWETYDGSQIRELVGTKS
GAINGMDVSPDGSYFVTGGEDKLLKVWRYNEGDAQQVGIGHSGEITRLKI
CPNQRHIVSVSADGAVLRWKFPFPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032327XLOC_032327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050995TCONS_00050995Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 49..93
e-value: 0.21
score: 20.7
coord: 317..356
e-value: 0.66
score: 18.1
coord: 631..670
e-value: 0.013
score: 24.7
coord: 460..500
e-value: 3.7E-5
score: 33.1
coord: 145..182
e-value: 1.8
score: 15.4
coord: 401..457
e-value: 47.0
score: 6.4
coord: 360..398
e-value: 0.64
score: 18.2
coord: 547..585
e-value: 49.0
score: 6.3
coord: 588..628
e-value: 1.0E-6
score: 38.3
coord: 96..137
e-value: 0.051
score: 22.7
coord: 505..544
e-value: 9.2E-6
score: 35.1
coord: 193..229
e-value: 86.0
score: 4.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 510..544
e-value: 0.0018
score: 19.0
coord: 635..669
e-value: 0.14
score: 13.0
coord: 159..182
e-value: 0.1
score: 13.4
coord: 469..500
e-value: 0.017
score: 15.8
coord: 53..93
e-value: 0.0049
score: 17.6
coord: 106..137
e-value: 0.0011
score: 19.7
coord: 590..627
e-value: 2.2E-5
score: 25.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 468..509
score: 13.148
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 596..637
score: 11.945
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 103..138
score: 9.105
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 160..191
score: 8.804
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 512..546
score: 10.475
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 638..675
score: 9.606
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 197..425
e-value: 5.9E-28
score: 97.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 426..570
e-value: 4.4E-26
score: 91.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 142..196
e-value: 8.3E-7
score: 27.9
NoneNo IPR availableGENE3D2.120.10.60coord: 25..141
e-value: 6.5E-20
score: 71.5
NoneNo IPR availableGENE3D1.10.10.670coord: 626..673
e-value: 5.2E-11
score: 41.8
NoneNo IPR availableGENE3D2.80.10.50coord: 571..625
e-value: 6.3E-13
score: 48.0
NoneNo IPR availableCDDcd00200WD40coord: 373..670
e-value: 3.73268E-41
score: 150.178
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 124..138
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 531..545
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 56..675
score: 45.164
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 6..291
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 212..550
coord: 579..672

Blast
[Close]
BLAST of TCONS_00050995-protein vs. Swiss-Prot (Human)
Match: CFA52 (Cilia- and flagella-associated protein 52 OS=Homo sapiens GN=CFAP52 PE=1 SV=3)

HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 337/672 (50.15%), Postives = 464/672 (69.05%), Query Frame = 0 
Query:    5 ADLDQLELDSTIGFAGNVPGGLLAHPNKKHLIYPLGNTIVVKNIATGSQKFLSGHTDNVSCVALSKSGQYVASGQSTYMGFKADVIVWDFESMSLYCRLVLHKVKVEALAFSPNEQYLATLGGQDDGSVVIWDLPRKEAVCGSPAAVPSAGTTYCVAFANNNNNIFVTGGNKTLRVWDLDSENRIIRPTDCNMGQLKRIVKCIQVSDDDKHIYCGTTSGDILQINLNTKLLCHYGPAKEKFSLGVLSLSLVEQ-NILIGAGDGTVAKVRVDGFKKLKSKKVDGEVTSITAPAGNLEKFFVGTQLSQIYQFNFSTFVEETISTCHYSSVKDISFPYNYSDVFATCSKNDIRVWNAKSSKELLRVVVPNMTCNAVDFFRDGKSIISAWDDGKIRVFTPESGKLRFIIHDAHNKGVTAIASTSTSKRIXETGIPVVFSCKTLYLFLAWDDGKIRVFTPESGKLRFIIHDAHNKGVTAIASTSTSKRIISGGGEGEVRVWDVNDKEYQMTRAMKEHKGAVTCIKVRSKDQQCVTSSTDGTCIIWDLERYVRNQIIFANTMFKVVCYRPDESQIITSGTDKNIGYWETYDGSQIRELVGTKSGAINGMDVSPDGSYFVTGGEDKLLKVWRYNEGDAQQVGIGHSGEITRLKICPNQRHIVSVSADGAVLRWKFPFPS 675
            A + +LELD+ IGF G+VP GL  HP+++H+IYPLG T++++ I T  Q FL GH +NVSC+A+S+SG+Y+ASGQ T+MGFKAD+I+WD+++  L  RL LHK K+EALAFSPN+ YL +LGG DDGSVV+W + +++A+CGSPAA  + G    V F+   + +F+T GN T+RVW+LD  NR I PT+C  GQLKRIV  I V DDD   Y GTT+GDIL++N  TKLL   GPAK+KFSLGV ++  ++   +L+G+G G +   +  G+K +K  ++ G +TSIT   G   +F VGT+ S IY+ +F+ F E  I+TCH+ +V+DI FP+  +++FATC+K DIRVW+  S++ELLR+ VPNMTC+ +DF RDGKSIISAW+DGKIR F PE+G+L ++I++AH  GVTAIA+TS  KR+   G                 +G++RV                                           W +  +  ++  A+KEHK +V+CI+V+  +++CVT+STDGTCIIWDL R  RNQ+I ANT+F+ VCY P+E QIITSGTD+ I YWE +DG+ IREL G+ SG+INGMD++ +G +FVTGG D L+KVW YNEG+   VG+GHSG ITR++I P  ++IVSVSADGA+LRWK+P+ S
Sbjct:    9 AQVAELELDAVIGFNGHVPTGLKCHPDQEHMIYPLGCTVLIQAINTKEQNFLQGHGNNVSCLAISRSGEYIASGQVTFMGFKADIILWDYKNRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFMTAGNGTIRVWELDLPNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGDILKMNPRTKLLTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPIKKIQLQGGITSITL-RGEGHQFLVGTEESHIYRVSFTDFKETLIATCHFDAVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGG----------------GEGEVRV-------------------------------------------WQIGCQTQKLEEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYTS 620
The following BLAST results are available for this feature:
BLAST of TCONS_00050995-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CFA520.000e+050.15Cilia- and flagella-associated protein 52 OS=Homo ... [more]
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