TCONS_00051158-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051158-protein
Unique NameTCONS_00051158-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051158-protein ID=TCONS_00051158-protein|Name=TCONS_00051158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MSGTPNRCGKCHQYPYNPCPNDDELRVEILAFRTQEGLRRLYQPKICCFN
VKFSEEVSVSSLQQEIEEYTDIPCSNQLLFEPYTEEPELLRLLYDADLMK
PILELNYIIEQRYVFIPEEDNLQKKTIKVLQLHLAVLDNDQLEAPVRKIS
EIHLSIWKRLTVKAFGSHKVLHVFVYQNFNKARLNHLIHEKWKIPISNQI
LITMGKEVKPSDVFSDNVVIYLAVTDRFEDNLFTLGIKNFEVFTLKFLTR
EEDLRTHQFKFVNDVKRYILKKYKIRLEDQSLVFRNQQLKGDQPLFDLHI
EENSMKPVVLNVIVVEDSFILTVFQNMIAYEDTFTVLVKNSYTISTIKRC
IEARTGVPFKYRQLYIGTTVLDDDEKTLQDYMFTPGWPDLVLKQKLMIRL
HFVDTGEKVEYSEIIDKNCRKTVKDLTKEILQLYGLKKCQLLEIRDENEV
KIDLKTRDLLVTVNELSLLINKDAASTCRLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032426XLOC_032426Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051158TCONS_00051158Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 321..407
e-value: 6.9E-8
score: 31.7
NoneNo IPR availableGENE3D3.10.20.90coord: 126..238
e-value: 0.0093
score: 15.4
NoneNo IPR availableGENE3D3.10.20.90coord: 47..125
e-value: 0.06
score: 13.0
NoneNo IPR availableGENE3D3.10.20.90coord: 239..318
e-value: 4.5E-7
score: 29.2
NoneNo IPR availableCDDcd01769UBLcoord: 262..304
e-value: 0.00406889
score: 34.165
NoneNo IPR availableCDDcd01769UBLcoord: 333..381
e-value: 0.00478386
score: 34.165
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 262..304
e-value: 8.1E-5
score: 22.2
coord: 332..386
e-value: 2.9E-5
score: 23.6
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 321..386
score: 10.702
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 331..386
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 244..305

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051158-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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