TCONS_00051164-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051164-protein
Unique NameTCONS_00051164-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051164-protein ID=TCONS_00051164-protein|Name=TCONS_00051164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MCCLEPVFQKKNHNKKNQNWVEAGLCTLHQNLDLSGYSLVTSRTKMWLWD
YFTGALKYLGLMNKNGKLVFLGLDNAGKTTLLHMLKDNRMGQHVPTLHPT
AEELTMGGMKFKTFDLGGHKQARRVWKQYFPAVDGIVFIIDVADPERLPE
SKAEFDSLLADEQLANAPILILGNKIDKPEAVGEDYIRQYFGLFGLTSGK
NVAAKDMNARPIELFMVSVLKRQGYGEGFRWLSQFIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032432XLOC_032432Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051164TCONS_00051164Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR006687Small_GTPase_SAR1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 95..119
score: 70.35
coord: 210..234
score: 64.71
coord: 67..90
score: 83.82
coord: 122..147
score: 57.47
coord: 167..188
score: 62.3
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 54..235
e-value: 8.8E-59
score: 197.8
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 48..235
e-value: 4.5E-18
score: 76.0
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 49..236
e-value: 1.2E-94
score: 330.4
NoneNo IPR availableGENE3D3.40.50.300coord: 55..237
e-value: 3.8E-39
score: 133.3
NoneNo IPR availableCDDcd00879Sar1coord: 47..236
e-value: 1.53728E-121
score: 345.802
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 64..186
e-value: 1.5E-18
score: 65.1
IPR006687Small GTPase superfamily, SAR1-typePROSITEPS51422SAR1coord: 59..236
score: 28.352
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 63..236

Blast
[Close]
BLAST of TCONS_00051164-protein vs. Swiss-Prot (Human)
Match: SAR1B (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.883e-100
Identity = 131/192 (68.23%), Postives = 164/192 (85.42%), Query Frame = 0 
Query:   47 WLWDYFTGALKYLGLMNKNGKLVFLGLDNAGKTTLLHMLKDNRMGQHVPTLHPTAEELTMGGMKFKTFDLGGHKQARRVWKQYFPAVDGIVFIIDVADPERLPESKAEFDSLLADEQLANAPILILGNKIDKPEAVGEDYIRQYFGLFGLTSGK-NVAAKDMNARPIELFMVSVLKRQGYGEGFRWLSQFIN 237
            W++  F+  L++LGL  K GKLVFLGLDNAGKTTLLHMLKD+R+GQHVPTLHPT+EELT+ GM F TFDLGGH QARRVWK Y PA++GIVF++D AD ERL ESK E DSL+ DE +AN PILILGNKID+PEA+ E+ +R+ FGL+G T+GK +++ K++NARP+E+FM SVLKRQGYGEGFRW++Q+I+
Sbjct:    7 WIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYID 198
The following BLAST results are available for this feature:
BLAST of TCONS_00051164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAR1B1.883e-10068.23GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]
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