TCONS_00051175-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051175-protein
Unique Name	TCONS_00051175-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	585

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051175-protein ID=TCONS_00051175-protein|Name=TCONS_00051175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MKLLIFGLILLQYYVSSELIVTKAERSIDLGSQLVKVSTQLSVFNGGSSV
NEVSVAVEEEQYKYLAFIEAVNKKDEETKLEVSSSKVKDAYLFTFKLGSS
LAKDASVTLLVEMVFSHSLEPFPAKITQSEKQQVVYKGNTYVFSPYLVKE
QKTTVKLASSTIESYSRLKPSSSSDNVITYGPYKEAKAFKKHEMKIHFEN
NSPFVIVNEMKRWIEVSHWGNIAVEETYHMTHEGAKLKNHFSRYDYQRQP
THAAVKSFKTVLPASASDVYYRDEIGNISTSNLLSQDDSVEVELRPRFPL
FGGWQTRYYLGYNLPAYQYLFNKGENFALKMRVVDHVFDDFVVDDLVLKI
VLPEGARNIKFVAPYEVVEGEQENHKTYLDTSGRPVVVIKKKNLVENHIQ
DFELRYNFSKMQLLHEPLLCVVAYYILFVSVIILVRLDFSITKDAAKESR
MKVASLIDDLLGACDRRSAIYASFDTALDKFKQGRDTGAFANATKKLRQD
YTNLTQTIADICAGLVKEDAEAGEKLNDLKKKETERKVILDQLITLAEKV
VAGKMGRPQYLENESNAMGKRGKLSDDIDALLGTL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032437	XLOC_032437	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051175	TCONS_00051175	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007676	Ribophorin_I

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0005783	endoplasmic reticulum

Vocabulary: **Molecular Function**
Term	Definition
GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007676	Ribophorin I	PFAM	PF04597	Ribophorin_I	coord: 21..434 e-value: 5.4E-140 score: 467.4

Blast

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BLAST of TCONS_00051175-protein vs. Swiss-Prot (Human)
Match: RPN1 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1)

HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0
Identity = 278/577 (48.18%), Postives = 392/577 (67.94%), Query Frame = 0

Query:   19 LIVTKAERSIDLGSQLVKVSTQ--LSVFNGGSSVNEVS--VAVEEEQYKYLAF--IEAVNKKDEETKLEVSSSKVK--DAYLFTFKLGSSLAKDASVTLLVEMVFSHSLEPFPAKITQSEKQQVVYKGNTYVFSPYLVKEQKTTVKLASSTIESYSRLKPSSSSDNVITYGPYKEAKAFKKHEMKIHFENNSPFVIVNEMKRWIEVSHWGNIAVEETYHMTHEGAKLKNHFSRYDYQRQPTH--AAVKSFKTVLPASASDVYYRDEIGNISTSNLLSQDDSVEVELRPRFPLFGGWQTRYYLGYNLPAYQYLFNKGENFALKMRVVDHVFDDFVVDDLVLKIVLPEGARNIKFVAPYEVVEGEQENHKTYLDTSGRPVVVIKKKNLVENHIQDFELRYNFSKMQLLHEPLLCVVAYYILFVSVIILVRLDFSITKDAAKESRMKVASLIDDLLGACDRRSAIYASFDTALDKFKQGRDTGAFANATKKLRQDYTNLTQTIADICAGLVKEDAEAGEKLNDLKKKETERKVILDQLITLAEKVVAGKMGRPQYLENESNAMGKRGKLSDDIDALLGTL 585
            LI    +R++DL S L KV+ +  L+   GGS+    S  +A+E E    LA   ++   + +EE  LEV  +K+K      FT KL  +L   A ++++VE V++H L P+P +ITQSEKQ VV++GN Y +SPY  K Q   VKLAS  +ESY++L   + S++++ YGP+++  A+ +   K+H+ENNSPF+ +  M R IEVSHWGNIAVEE   + H GA LK  FSRYDYQRQP    ++++SFKT+LPA+A DVYYRDEIGN+STS+LL  DDSVE+E+RPRFPLFGGW+T Y +GYNLP+Y+YL+N G+ +ALKMR VDHVFD+ V+D L +KI+LPEGA+NI+  +PYE+     E H TYLDT GRPV+V  KKNLVE HIQD  + Y F+K+ +L EPLL V A+YILF +VII VRLDFSITKD A E+RMKVA + + +L   ++R  +Y  FD  ++++KQ RD     +  K L  ++  LT  IA + + L  E ++  +++++++K + + K ++ +    AE++VAGK+ +  Y+ENE    GKR +L   ID +L  L
Sbjct:   31 LINEDVKRTVDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDEEENNLEVRETKIKGKSGRFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVKLASRNVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACITEQVLTLVNKRIGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKALTSEIALLQSRLKTEGSDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKLISGKRQELVTKIDHILDAL 607

The following BLAST results are available for this feature:

BLAST of TCONS_00051175-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051175-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RPN1	0.000e+0	48.18	Dolichyl-diphosphooligosaccharide--protein glycosy...	[more]

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TCONS_00051175-protein (polypeptide) - C. hemisphaerica