TCONS_00051400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051400-protein
Unique NameTCONS_00051400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1918

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051400-protein ID=TCONS_00051400-protein|Name=TCONS_00051400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1918bp
CLLNCFEKLNPEEPLKMKSECSNCNGLTKTFYRWRLYKRDNTTDNDLGSE
DTSLELKTSTSISNPNIALKRNKLLVGTNYVLKLSAWKDGGSESKNAGYG
EFYFTVNDRPSGGDCLLSPSTGVALEDVFKVTCANWFDTDSPLLYKIDSL
RNGIIQNLYYGTEGSSTMYLPLGDPFLNYQYQIIVTIMDKYHFGTKMTFN
VTVKEPTTVNYDSINNNLETMSSDVDGLQKLARYALAAGSVMNSKESSGG
NGATGEGDDQAMKERSKMLKSISKVTPCSLSGIKQMGGVQMEMTKTGINE
EAEEESGEALSKMSACMSNAPSSDPDMEDTANAMFLASSNVLKAGLSRNT
NMTNATGKSSIDKTIDTFNKIGGAFMRQMVSGDEKKTLNTGDMQVEMSQI
ADSADEDADEDTGFKLPNLDHLYANQSMNGNSEGDGTEQKSSVGAMLTSM
DKNPYSSASGSDDLNSTVMGLALTGPDGSPMDLSGQELTMFVKRNDGSDE
PAPIFDYNVHERLPMTYHRVNFTSENKTMVIELRPEDPLFEAMVFIAFER
KPTGRSNSTAYSYKQQSKERSTLPNGKVPNSTFHHFVTASELNGTGSYYV
GIRLLPVEQEFRSLYGRDPVLKYSLRMWEAQCKLWNDELNMYSSKGCKVG
PKTTFSKTQCQCIVGADENEDDENFSTTTTTTTTTTTQSPFAKSHSPAPQ
RTKRKITRATFASAFFPAPNPIDFSTVFQGFTNLDENPLVFSVVLSIFGV
YLMLMFWARREDRKDVAKAGVTALVENDPFDRQFYEITVYTGFPANAGTT
ANVFIELSGDESQTEARQLRDNSRKLFQSRAENVFLASYPKHIGDLQYVR
IWHDNTGKSPAWNLSRVVIHDLNADRKYLFINDDVIAVEAGDGSLERTIP
IAGPDEVKSFNHLFYSTTQRNITDKHIWFSIFIRPAKSRFTRVQRLSCCL
TLLYFTMLSSMMFFEVGGAEASAQTTYHLGPFAFAPSQIGIGVMTTLIIF
PINILIVGVFRSIGPKPAPADMAKRKARSFWVWHEFKELFTCCVSKPPET
LIDIMAQPDSGRESRLSTMTSGSAESTTTLRECVSLDTEIGFKLDTPKQE
KEREAKLKKKQKQKRKLPWWMKYFAWMLNILASFTAAFFVVLYGFQFGKE
KSSQWFSTFFLSFIQDVFIAQPMKVLGLALFIALILKKPSDEEDDDAKDT
KEMGYENRIQNDEEFLSNTSSLRRKPSENKEPKKNDIIRFQPPSKEKVQA
LRDYRLKEIKMWNVLRELILYLMYVVVLCQVSYSHLDPKSFQLRQSSFDT
FVKASYGGVNFEKTNKLSDVWQWLETTVVEGLFKESVYTGQQAIPGYTQD
YYSNVFGGARIRQIRIQPDSCTVHEMFDQLIPRCHDEYSWAEEDVSNYDP
GWEKVKNHTHFPLHYKSWEYQTSTELDTYPFVGRMAAYAGGGYTADLVFD
QKFSLETLNILKKDNWIDERTRALFVEITTYNAQVNLFTVMNLLVEVLPT
GGLQHFSSIRIARLYTFGGSTESFTLACQFFVILFMIVFIYKESKKIYRQ
KRAYFSGFWNLLEFVLIVLTLTSLAIFFRRMFMVDSAVKGIQDNPGKFVS
FNKVVQWDTMFSVLSSIVVFMSCLKGLRLLQYNKTISILSSTLQGCARPL
GAFSIIFLVFFMAFTIFAYIMFMPHLEKFSSFVTSMESVMGLLLGDFDFS
KIESTKPILGRFWFCLLMLFGSMYMMNVFLAIIMDTYCVVTEDIALQNNE
HEIVDFMVNKFLVVFGRGDGGQKALLASIAEKERMKQLADEEKEAEEENN
RKTKKPRSKVSYRPQRKQTEHGKYFKMIDDEIEMKFAQLDDSLDGFWMDF
SNQEQPLHRNTKQEYGCGLYGDSNHSNRSRYQQQQNGRGIPNMAFDYQEE
KMELLIQRDLEEELQRWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032572XLOC_032572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051400TCONS_00051400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003915PKD_2
IPR001024PLAT/LH2_dom
IPR002859PKD/REJ-like
IPR013122PKD1_2_channel
IPR014010REJ_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1778..1805
NoneNo IPR availableGENE3D1.10.287.70coord: 1484..1740
e-value: 1.4E-13
score: 50.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1219..1238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 555..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1788..1818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..699
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1615..1737
coord: 1521..1577
IPR003915Polycystic kidney disease type 2 proteinPRINTSPR01433POLYCYSTIN2coord: 1528..1550
score: 19.13
coord: 1713..1734
score: 36.36
coord: 1348..1367
score: 30.0
coord: 1652..1673
score: 34.55
coord: 1605..1630
score: 20.0
coord: 1559..1579
score: 32.38
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 783..891
e-value: 6.7E-4
score: 14.9
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 784..910
e-value: 6.8E-33
score: 112.9
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 785..887
e-value: 6.1E-13
score: 49.3
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 783..900
score: 29.125
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 782..893
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 1..229
e-value: 2.9E-38
score: 131.8
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1310..1738
e-value: 1.6E-104
score: 349.9
IPR014010REJ domainPROSITEPS51111REJcoord: 1..196
score: 18.286

Blast
BLAST of TCONS_00051400-protein vs. Swiss-Prot (Human)
Match: PKDRE (Polycystic kidney disease and receptor for egg jelly-related protein OS=Homo sapiens GN=PKDREJ PE=2 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 3.214e-97
Identity = 278/1116 (24.91%), Postives = 486/1116 (43.55%), Query Frame = 0
Query:  719 PNPIDFSTVFQGFTNLDENPLVFSVVLSIFGVYLMLMFWARREDRKDVAKAG-VTALVENDPFDRQFYEITVYTGFPANAGTTANVFIELSGDESQTEARQLRDNSRKLFQSRAENVFLASYPKHIGDLQYVRIWHDNTGKSPAWNLSRVVIHDLNADRKYLFINDDVIAVEAGDGSLERTIPIAGPDEVKSFNHLFYSTTQRNITDKHIWFSIFIRPAKSRFTRVQRLSCCLTLLYFTMLSSMMFFEVGGAEA--SAQTTYHLGPFAFAPSQIGIGVMTTLIIFPINILIVGVFRSIGPKPAPADMAK---------RKARSFW-----VWHEFKELFTCCVSKPPETLIDIMAQPDSGRESRLSTMT------------SGSAESTTTLRECVSLDTEIGFKLDTPKQEKEREAKLKKKQKQKR-KLPWWMKYFAWMLNILASFTAAFFVVLYGFQFGKEKSSQWFSTFFLSFIQDVFIAQPMKVLGLALFIALILKKPSDEEDDDAKDTKEMGYENRIQNDEEFLSNTSSLRRKPSENKEPKKNDIIRFQPPSKEKVQALRD--YRLKEIKMWNVLRE---------------LILYLMYVVVLCQVSYSHLDPKSFQLRQSSF--DTFVKASYGGVNFEKTNKLSDVWQWLETTVVEGLFKESVYTGQQAIPGYTQDYYSNVFGGARIRQIRIQPDS--CTVHEMFDQLIPR----CHDEYSWAEEDVSNYDPGWEKVKNHTHFPLHYKSWEYQTSTELDTYPFVGRMAAYAGGGYTADLVFDQKFSLETLNI--LKKDNWIDERTRALFVEITTYNAQVNLFTVMNLLVEVLPTGGLQHFSSIRIARLYTFG--GSTESFTLACQFFVILFMIVFIYKESKKIYRQKRAYFSGFWNLLEFVLIVLTLTSLAIFFRRMFMVDSAVKGIQDNPGKFVSFNKVVQWDTMFSVLSSIVVFMSCLKGLRLLQYNKTISILSSTLQGCARPLGAFSIIFLVFFMAFTIFAYIMFMPHLEKFSSFVTSMESVMGLLLGDFDFSKIESTKPILGRFWFCLLMLFGSMYMMNVFLAIIMDTYCVVTEDIALQ-NNEHEIVDFMVNKFLVVFGRGDGGQKA 1774
            PNP+D         +L +NP+    VL I  +Y+ L FWA   D  D    G V  L +NDP+D   Y +T++TG    +GT ANVF++L G  S ++   L           + N FL +    +GD+  +R+WH+N G+SP+W LSR+ + +L +   +LFI    ++V   D +L+RT  +  PDE  +    F+     N+   H+WFSIF       F R+QRLSCCL +L  ++L ++MFF +   E   S +  Y           + IG+ + LI  P+ +LI  +F     KP  AD+ +          +A   W      WH ++         P E     +A+P S  + RL   +                ++  TL    + +  I    D   ++   +  L++ +K+ R  LPWW  Y AW L    S  ++FF+V YG  +G +KS +W    F SF Q V + QP K++ L+ F             +  K  K + +  + +  E  L                   D +R  P   E++Q + D   R++  +M+  L E                +L+L Y++         L           F  + F++  +  ++     KL D+++WL + ++  L  +         P +  +  S + G   +RQ+R +     C   E F Q   R    CH +Y    ED  NY   W +V            + Y+       Y   G +  Y  GGY      +Q+    TL +  L++ NW+DE+T A+ +E+TT+N  +NLF  ++++ EV   G +    S+    L  F    S E +       +++F + ++  E   I +++ +Y    +NLL F L  +    + +F R+ F+    ++    NP  F+ F+ V Q D +  ++   ++F++ LK LR  ++   + +    +Q     +   + +  V+F  +  F Y++F  H   +S+ + S ++V    +  F  ++  + + ILG  +    ML     ++N+F A+I+  Y  + + +  + ++E E + ++  K   +F       KA
Sbjct: 1167 PNPVDLR--LNIIKSLHQNPVTLFTVLFIILLYVGLAFWALYRDEMDQHLRGHVIVLPDNDPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGTVSTSDVHCLSHPHFTTLYRGSINTFLLTTKSDLGDIHSIRVWHNNEGRSPSWYLSRIKVENLFSRHIWLFICQKWLSV---DTTLDRTFHVTHPDERLTRKDFFFIDVSSNLRKNHMWFSIFASVVAKTFNRLQRLSCCLAMLLSSLLCNIMFFNLNRQEQTESRERKYM--------RSMMIGIESVLITIPVQLLITFLFTCSQRKPQ-ADLKEVSPQKHPLMSEASEHWEEYLRKWHAYET----AKVHPRE-----VAKPASKGKPRLPKASPKATSKPKHRHRKAQIKTPETLGPNTNSNNNIEDDQDVHSEQHPSQKDLQQLKKKPRIVLPWWCVYVAWFLVFATSSISSFFIVFYGLTYGYDKSIEWLFASFCSFCQSVLLVQPSKIILLSGF-----------RTNKPKYCKNLSWSTKYKYTEIRL-------------------DGMRMHP---EEMQRIHDQIVRIRGTRMYQPLTEDEIRIFKRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFS-MDLATVTKLEDIYRWLNSVLLPLLHND-------LNPTFLPESSSKILGLPLMRQVRAKSSEKMCLPAEKFVQNSIRREIHCHPKYGIDPEDTKNYSGFWNEVDKQA-IDESTNGFTYKPQGTQWLYYSYGLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNWLDEKTWAVVLELTTFNPDINLFCSISVIFEVSQLGVVNTSISLHSFSLADFDRKASAEIYLYVA---ILIFFLAYVVDEGCIIMQERASYVRSVYNLLNFALKCIFTVLIVLFLRKHFLATGIIRFYLSNPEDFIPFHAVSQVDHIMRIILGFLLFLTILKTLRYSRFFYDVRLAQRAIQAALPGICHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHSTQTVFSYCVSAFQNTEFSNNR-ILGVLFLSSFMLVMICVLINLFQAVILSAYEEMKQPVYEEPSDEVEAMTYLCRKLRTMFSFLTSQSKA 2213          
The following BLAST results are available for this feature:
BLAST of TCONS_00051400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKDRE3.214e-9724.91Polycystic kidney disease and receptor for egg jel... [more]
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