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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051551-protein ID=TCONS_00051551-protein|Name=TCONS_00051551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=624bp
MNVINCWGVGSVRQHSGFCCGDKYYAPIGRCLVTWDMKIKESEPVRQIHN
DLITVMIPNKLDEILTVGYGGQVKLWSKDWQLLTSFQSDTKNVIYGSWSP
DGSEFSFSSKGPKQMLAVYKKDTLIEQYTQNVKITPKWIYQAPQTSKKEV
KGRKSYDMFNASIHKDNLEILAAYCTREGCELFLISQSGDTIKRGPISPI
GDPKNDMQCVSEINNDRIAIGVQHGIFGFYHIDTLDLLTVIQATGSPRIC
MWDSDLFVTTAYVSGIISFWSQDGQLLKEIKGGPIGSIVQMNRVEQFTYY
ICGIMSLHKVSFDYENSCIASIDDISYLTLTDCGLDISNTGLVASGDFTG
NIYLWQTPSRKSVCSFNVTYSIRCLLWVGDFLLIGCLNSEVSCWKYNSKV
TPEKEVNSVRNLYTVIGDPVALATNSDESKLALGTTAGYLYVFDLKKNEE
SLDIEVFHCSQIHKPKVNNDGSFLNMEIWNLRWSIDDRYIATTSEDQTAI
VSDSLTGEVLKTLTGHTTAVTDLSWKLLASGKHVLATCADDRTVRVYDGL
TFELITVLKTELVYGWYTLTYMEINEKNDRLFVTTQNGYLLSWDLNSFEL
IYCEKLHAGSIEGIALSKDGQSLX Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 405..444
e-value: 450.0
score: 0.3
coord: 506..548
e-value: 1.6E-5
score: 34.3
coord: 315..356
e-value: 23.0
score: 8.4
coord: 359..395
e-value: 9.4
score: 10.9
coord: 79..120
e-value: 260.0
score: 1.8
coord: 234..271
e-value: 130.0
score: 3.8
coord: 458..503
e-value: 11.0
score: 10.3
coord: 41..77
e-value: 63.0
score: 5.6 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 126..473
e-value: 2.0E-22
score: 79.0 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 549..624
e-value: 5.8E-8
score: 31.8 |
| None | No IPR available | GENE3D | 1.10.10.670 | | coord: 499..548
e-value: 4.1E-11
score: 42.1 |
| None | No IPR available | GENE3D | 2.40.10.120 | | coord: 474..498
e-value: 0.035
score: 13.2 |
| IPR011042 | Six-bladed beta-propeller, TolB-like | GENE3D | 2.120.10.30 | | coord: 19..119
e-value: 1.3E-5
score: 24.0 |
| IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 471..624
score: 12.947 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 49..292 |
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily | SUPERFAMILY | 50998 | Quinoprotein alcohol dehydrogenase-like | coord: 333..614
coord: 213..288 |
Blast
The following BLAST results are available for this feature:
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