TCONS_00051589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051589-protein
Unique NameTCONS_00051589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051589-protein ID=TCONS_00051589-protein|Name=TCONS_00051589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MDKSLKVNNFFGELPERRGYGAECGKLAAVVVFLLTLARHRTSNNKEIIS
LEDLGDIAVIVLAIISAQLLRCLYLLVEERRCLFSRYNGSIQRMLKACLP
DSPSTVISIKIGLFLISFAGSSFYWITSTEPRLDRSLFIVITFILSLDVL
HLSKAEISHLNETKNQHVADGLAWSYYFGYLKLILPRFPEMINLAHSEDD
TFKADGVDLRDQLSSEKLFIIIPKNCYTHAQLGQFDDRICRDGFSTPEFK
YTRAGVKERSYKNTAWRIDYPGEESLYVLMEYATPCLSMHDMMLHARSQF
DEEDLEAQVKEFSIKLQSILDSDEKCKGRYHLILCGDIRHQKLGDLIKEA
VQKEREEQKKGQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032670XLOC_032670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051589TCONS_00051589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029158STING
Vocabulary: Biological Process
TermDefinition
GO:0032481positive regulation of type I interferon production
GO:0002218activation of innate immune response
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002218 activation of innate immune response
biological_process GO:0032481 positive regulation of type I interferon production
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029158Stimulator of interferon genes proteinPFAMPF15009TMEM173coord: 58..342
e-value: 1.2E-59
score: 201.8

Blast
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BLAST of TCONS_00051589-protein vs. Swiss-Prot (Human)
Match: STING (Stimulator of interferon genes protein OS=Homo sapiens GN=TMEM173 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.654e-27
Identity = 88/289 (30.45%), Postives = 140/289 (48.44%), Query Frame = 0 
Query:   76 LVEERRCLFSRYNGSIQRMLKACL--PDSPSTVISIKIGLF--LISFAGSSFYWITSTEPRLDRSLFIVITFILSLDVLHLSKAEISHLNETKNQHVADGLAWSYYFGYLKLILPRFPEMINLAHSEDDTFKADGVDLRDQLSSEKLFIIIPKNCYTHAQLGQFDDRICRDGFSTPEFKYTRAGVKERSYKNTAWRIDYPGEESLYVLMEYATPCLSMHDMMLHARSQFDEEDLEAQVKEFSIKLQSILDSDEKCKGRYHLILCGDIRHQKLGDLIKEAVQKEREEQKK 360
            L EE R + SRY GS  R ++ACL  P     ++ + I  +  L +  G  F W+ +    L ++L I+      L +  L+ AEIS + E  N +VA GLAWSYY GYL+LILP     I        T+     +L     S++L+I++P +C     L   D  I R     P+     AG+K+R Y N+ + +   G+ +   ++EYATP  ++  M  ++++ F  ED   Q K F   L+ IL    + +    LI   +        L +E ++  R+E+K+
Sbjct:   66 LAEELRHIHSRYRGSYWRTVRACLGCPLRRGALLLLSIYFYYSLPNAVGPPFTWMLALL-GLSQALNIL------LGLKGLAPAEISAVCEKGNFNVAHGLAWSYYIGYLRLILPELQARIR-------TYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMADPNI-RFLDKLPQQTGDHAGIKDRVYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQEEKE 339
The following BLAST results are available for this feature:
BLAST of TCONS_00051589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STING3.654e-2730.45Stimulator of interferon genes protein OS=Homo sap... [more]
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