TCONS_00051608-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051608-protein
Unique NameTCONS_00051608-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1037

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051608-protein ID=TCONS_00051608-protein|Name=TCONS_00051608-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1037bp
MDIYNFIYVVILIFNVLLPNDGVRAERSCTIKEKRLDCTKLNMTVFESTI
FPTNIEHIVLDNNKLTEFPNLEKFPNLKSISISHNLLTSLKNFGSFLHLE
LLNLSHNQLENLDGLFNSTLTKLQKLFISHNQLEKIDKIFQSSFPNLQSL
DASHNKIKQLIGSRRRSRSLFPNLKYLALNNNEVSYVKYFFDHLSSTETI
ILSYNKLQKLTNEHFITLVQRNNLKELYLDHNLLKSIELWFRFLIKLDLS
HNRLETFKNDAFYLESLTEMDLSGNKIAFPSKDLFSKTQAMARLNLSNNN
IRSLSENSFMYLQNLKYLDLSTNNISVGMKEFDKVFLWLKNLKTLNIRRN
KILLLPTNSFPGLGALEVLDLAGNDIKYIERNALSNLKNLVELNIDTRDL
DCDCSITWFRDWLSLQTTLIKKSISGVCASPPWLRNKNAMTILDSELTCV
KHNKDYTIRPKFVIQPTSKYIKIHGNVSLECVATSSVENLILINWYLDGQ
PVHHRKTVESKLQYVRANLYKKSSTLLLNDIRHDERGSYWCDAVNIYGSR
RSKEANVTIVVPPTISKRPQPKIIKRTGDDVRLPCSAEGIPAPLISFKKI
TGDETAWKYATINRRIHYEKETFSFIVRDLKVEDSGFYACSASSRAGKVN
ATVQLVVIAKPSFIRPMKSKRVPPGTVAVLDCIISGNPRPHIQWFKDNHM
LRPSKSITLSNQMMVINNFNERDVGSYSCHASNDLGSASQSARLELSQTE
REQATPNVAIIAMTVIIVFTVTSFIWFMMFCYCRRKRKQEREISRAPTDD
HAHLSQYKEGLVPELPKDYLLRCNGKLISPTPPVLTPAIDTVQRLSDSEP
LLEHSMRRSGIAFEDDTQIDDCPEANLLMRDTLRYLREQTDAPPLGKVTT
SQLQKSQIDNDYMTDEESSDQHDSGVLVHYKSGSSLCEQSLLRESRGRPY
VTIDVTRDKRKESGIRYHHKHSLSVDDSSVNSNQPSSLQKRKRLTSQSNP
NAREESSGIESGVSSSSESISSFKDVDALGQQNVEVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032678XLOC_032678Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051608TCONS_00051608Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000483Cys-rich_flank_reg_C
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR032675L_dom-like
IPR025875Leu-rich_rpt_4
IPR001611Leu-rich_rpt
IPR013098Ig_I-set
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 363..389
e-value: 220.0
score: 4.6
coord: 120..141
e-value: 9.8
score: 15.1
coord: 312..334
e-value: 140.0
score: 6.3
coord: 264..284
e-value: 570.0
score: 1.2
coord: 241..262
e-value: 450.0
score: 2.1
coord: 96..114
e-value: 280.0
score: 3.7
coord: 144..165
e-value: 150.0
score: 6.1
coord: 74..95
e-value: 58.0
score: 9.3
coord: 52..73
e-value: 88.0
score: 7.9
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 288..307
e-value: 34.0
score: 9.7
coord: 52..71
e-value: 19.0
score: 11.7
coord: 74..93
e-value: 250.0
score: 3.0
coord: 339..358
e-value: 130.0
score: 5.1
coord: 120..139
e-value: 560.0
score: 0.4
coord: 98..115
e-value: 490.0
score: 0.8
NoneNo IPR availablePFAMPF13927Ig_3coord: 459..545
e-value: 2.1E-10
score: 40.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 962..1025
NoneNo IPR availableCDDcd00096Igcoord: 678..743
e-value: 1.87827E-10
score: 57.8843
NoneNo IPR availableCDDcd00096Igcoord: 477..553
e-value: 9.40444E-7
score: 46.7135
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 363..386
e-value: 0.093
score: 21.8
coord: 120..142
e-value: 1.6
score: 17.8
coord: 288..311
e-value: 75.0
score: 6.1
coord: 264..287
e-value: 9.3
score: 13.5
coord: 74..95
e-value: 180.0
score: 2.9
coord: 339..362
e-value: 3.1
score: 16.8
coord: 96..118
e-value: 31.0
score: 9.2
coord: 144..166
e-value: 220.0
score: 2.3
coord: 312..334
e-value: 100.0
score: 5.0
coord: 223..243
e-value: 270.0
score: 1.6
coord: 171..193
e-value: 97.0
score: 5.2
IPR000483Cysteine-rich flanking region, C-terminalSMARTSM00082lrrct1coord: 399..450
e-value: 1.3E-4
score: 31.3
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 667..747
e-value: 1.1E-6
score: 38.2
coord: 570..658
e-value: 4.2E-8
score: 42.9
coord: 466..560
e-value: 1.6E-6
score: 37.7
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 472..548
e-value: 0.037
score: 20.9
coord: 576..647
e-value: 2.0E-5
score: 34.1
coord: 673..736
e-value: 1.9E-9
score: 47.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 565..657
e-value: 9.6E-19
score: 67.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 658..751
e-value: 1.3E-22
score: 79.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 456..564
e-value: 5.4E-17
score: 61.1
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 154..275
e-value: 3.6E-18
score: 64.7
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 22..153
e-value: 4.3E-26
score: 90.8
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 276..455
e-value: 2.0E-33
score: 114.8
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 34..239
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 170..437
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 53..93
e-value: 1.0E-6
score: 28.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 266..325
e-value: 1.9E-11
score: 43.5
coord: 341..396
e-value: 7.9E-11
score: 41.5
coord: 98..157
e-value: 2.2E-7
score: 30.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 146..167
score: 7.288
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 223..244
score: 7.358
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 122..143
score: 7.296
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 266..287
score: 5.733
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 173..194
score: 5.479
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 196..217
score: 5.548
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 76..97
score: 7.003
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 98..119
score: 8.759
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 341..362
score: 6.072
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 245..264
score: 5.325
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 290..311
score: 7.027
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 314..334
score: 6.026
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 54..75
score: 7.358
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 365..386
score: 6.711
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 661..745
e-value: 1.0E-16
score: 60.7
coord: 563..657
e-value: 2.3E-10
score: 40.3
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 563..656
score: 9.609
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 460..558
score: 12.187
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 661..747
score: 14.092
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 561..664
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 460..567
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 654..744

Blast
[Close]
BLAST of TCONS_00051608-protein vs. Swiss-Prot (Human)
Match: LRIG2 (Leucine-rich repeats and immunoglobulin-like domains protein 2 OS=Homo sapiens GN=LRIG2 PE=2 SV=3)

HSP 1 Score: 299.286 bits (765), Expect = 9.124e-86
Identity = 227/748 (30.35%), Postives = 374/748 (50.00%), Query Frame = 0 
Query:   29 CTIKEKRLDCTKLNMTVFE----STIFPTNIEHIVLDNNKLTEFPNLEKFPNLKSISISHNLLTSLKNFGSFL-HLELLNLSHNQLENLDGLFNSTLTKLQKLFISHNQLEKIDKIFQSSFPNLQ--SLDASHNKIKQL--------------IGSRRRSRSL-------FPNLKYLALNNNEVSYVKYF-FDHLSSTETIILSYNKLQKLTNEHFITLVQRNNLKELYLDHNLLKSI-ELWF---RFLIKLDLSHNRLETFKNDAF-YLESLTEMDLSGNKIAFPSKDLFSKTQAMARLNLSNNNIRSLSENSFMYLQNLKYLDLSTNNISVGMKEFDKVFLWLKNLKTLNIRRNKILLLPTNSFPGLGALEVLDLAGNDIKYIERNALSNLKNLVELNIDTRDLDCDCSITWFRDWLSLQTTLIKKSISGVCASPPWLRNKNAMTILDSELTCVKHNKDYTIRPKFVIQPTSKYIKIHG-NVSLECVATSSVENLILINWYLDGQPVHHRKTVESKLQYVR--ANLYKKSSTLLLNDIRHDERGSYWCDAVNIYGSRRSKEANVTIVVPPTISKRPQPKIIKRTGDDVRLPCSAEGIPAPLISFKKITGDETAWKYATINRRIHYEKETFSFIVRDLKVEDSGFYACSASSRAGKVNATVQLVVIAKPSFIRPMKSKRVPPGTVAVLDCIISGNPRPHIQWFKDNHMLRPSKS--ITLSNQMMVINNFNERDVGSYSCHASNDLGS 737
            C+ +   LDC++  +        S + P +   +   +N+L+ +    +   L+ + +++N LT +  FG    ++ LL+L HN +  ++         L+ L +S N    I +I  SSFP +Q   L+ S+N+I  L              +   R   S+        P+L++L L  N +  V+   F  L S  ++ +  N + KL +  F  L   NN++EL L+HN L  + + W    R L +L +S N +E    DA+ + + L+E+DLS N++    +  F     + RLNL +N +  +++  F +L NL+ LDL  N IS  +++  + F  L +L  L ++ N+I  +   +F GL +LE LDL  N I  I+ NA S   +L EL ++T  L CDC + W   WL       + S++  CA P WL  ++ + +   +  C     D  ++P+    P +  I + G NV+L C A SS ++ +   W  D + ++   T E+ ++Y +      + +S L L ++   + G Y C   N +GS  S++A +T+   P+  K P    I RTG   RL C+AEG PAP IS++K  G +     A   RR+H   E   F + ++K+ED G Y+C A + AG ++A   L V+  PSFIRP++ K V  G  AVL CI  G+P P + W KD+  L  ++      +NQ+++I +    D G Y+C  SN LG+
Sbjct:   47 CSCRIPLLDCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLSNWNISLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSN---IISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGL---NNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQ-THLKELILNTSSLLCDCHLKWLLQWLVDNN--FQHSVNVSCAHPEWLAGQSILNVDLKDFVC-----DDFLKPQIRTHPET-IIALRGMNVTLTCTAVSSSDSPMSTVWRKDSEILYDVDT-ENFVRYWQQAGEALEYTSILHLFNVNFTDEGKYQCIVTNHFGSNYSQKAKLTVNEMPSFLKTPMDLTI-RTGAMARLECAAEGHPAPQISWQKDGGTDFP---AARERRMHVMPEDDVFFIANVKIEDMGIYSCMAQNTAGGLSANASLTVLETPSFIRPLEDKTVTRGETAVLQCIAGGSPAPRLNWTKDDGPLLVTERHFFAAANQLLIIVDAGLEDAGKYTCIMSNTLGT 774
The following BLAST results are available for this feature:
BLAST of TCONS_00051608-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRIG29.124e-8630.35Leucine-rich repeats and immunoglobulin-like domai... [more]
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