TCONS_00051618-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051618-protein
Unique NameTCONS_00051618-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length845

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051618-protein ID=TCONS_00051618-protein|Name=TCONS_00051618-protein|organism=Clytia hemisphaerica|type=polypeptide|length=845bp
QNLVVTLLTAGHCVGSVMFLIEGSGGKVLYTGDFRLGEKEISKIPTSFCN
VKSVYVDTTFCCPLVPDFPTRVDTTEAIISIIKSWIEKGPNYMIHLKCKG
RYGYEYIMKEVAKKFKTKLHVNEWRLKFSSKLPYMLEHFTTTSHYTQIHC
CYYGRLSTSSAKALPCGMHFIDGRPCNVLTIVPSSLIFIQNGEIPKEGKI
WNAKQHIWRVFHSMHASYNEMRILLRYLKPQNIYPFVPPADCQDVIVAYN
RLQDLQCKENETMDDSTQTNLERSLPIEENTTWKQGLERAKPVKITSPPQ
MKNTSRLFSPPPARRKKKRSSASNLNHTNERMVSSSKRLSLDESRSSKKM
TSLQDSACDQVTSLKTSSSAVVTGSENLDDRQSFSPSKGLQDNFTKTRKV
DSPLKQREEDVSFLSKPTIHRIERTGPSPKGKDKDEPGIVFVEEGRQIVE
ETQDLVIPKSTNQQKILKNAEKRYYAPHETQPMNIHNQVENKSKKKDFTT
VPITFVENALEENQDKSHSLENPLRTIIERTSQIIEEDSQCGENESKAKT
NAVESVLRSSLIEDSENSYTEQSPNKCKTSSKISDFSDTKTTVQRSSEIK
DSEFSAVEDSECSVVDRKQTNRLRSQGTYQKSLDSNTTHRSSRIEEASEN
SFKDHSPNKMNDDSQKTIRYLNNSSRIIEEFSQVIEDFSEENFSQSTEDY
SNAITNTEITEDETNRIVPSNAEIERRNRSASKPVKSAGVTVVECDSESK
SVNSTNNSNRTVQYSVFNETGKFGNETELGHSVNENPSDDVAAERNVQID
DVINISSGDEDDTVSESEEDNDSTLSLIESDENSLDNSMEFSQVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032680XLOC_032680Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051618TCONS_00051618Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR011084DRMBL
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 845..845
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 804..845
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..666
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 1..128
e-value: 3.6E-17
score: 61.8
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 2..244
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 135..239
e-value: 9.8E-10
score: 38.5

Blast
[Close]
BLAST of TCONS_00051618-protein vs. Swiss-Prot (Human)
Match: DCR1C (Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 2.657e-45
Identity = 90/246 (36.59%), Postives = 141/246 (57.32%), Query Frame = 0 
Query:    1 QNLVVTLLTAGHCVGSVMFLIEGSGGKVLYTGDFRLGEKEISKIPTSFC-----NVKSVYVDTTFCCPLVPDFPTRVDTTEAIISIIKSWIEKGPNYMIHLKCKGRYGYEYIMKEVAKKFKTKLHVNEWRLKFSSKLPYMLEHFTTTSHYTQIHCCYYGRLSTS-SAKALPCGMHFIDGRPCNVLTIVPSSLIFIQNGEIPKEGKIWNAKQHIWRVFHSMHASYNEMRILLRYLKPQNIYPFVPPA 240
            + +VVTLL AGHC GSVMFL +G+ G VLYTGDFRL + E +++          +++SVY+DTTFC P     P+R +    ++ +++SWI + P +++ L CK  YGYEY+   ++++   ++HVN  +L     +P +L H TT  + TQIH C + +         LPCG+   +  P ++++I PS++ F +     K   I    +  +R   S H+SY+E++  L YL P N YP V P 
Sbjct:  104 EEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN--KLDMFRNMPEILHHLTTDRN-TQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSR--KTNVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPV 344
The following BLAST results are available for this feature:
BLAST of TCONS_00051618-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCR1C2.657e-4536.59Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV... [more]
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