TCONS_00051624-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051624-protein
Unique NameTCONS_00051624-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length732

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051624-protein ID=TCONS_00051624-protein|Name=TCONS_00051624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MNNLLSAKGTKKFIRHLAKTQPTAFNTLVATAGAYGVYYAYAKLKNRDNN
EAIKGFSSYNPQEMDKNEENNKGRKKRYQINKEYYEKLMQIIKIILPGVW
TKEFAFLSAHTIALICRAFLSIYVATLDGKLAKCIVEKKLMRFLYLLTQW
IGIAVPATFINSLLKYLEGKLSLAFRTQLVRHAYKLYFDKQTYYKVGNLD
SRLSSPDESLTEDLRLFCDSIAHLYSHMTKPILDLLLVCMTLSKMSNKRG
QSWIQPISIASLVTVTTGHILKMSSPAFGKLVSEESSRRGTLRTVHSRVI
TNSEEIAFYGGHKVEHNLLQKTYQSLAGQINLILRKKLWYVMLEQFLMKY
VWSASGLIMVSLPIMLGKDVSGSMSEQISERSQAFTTSRNLLLSGADAVE
RIMTSFKEIIELAGYTERVHSMLSVFEDIHKEHYIRLPASKSFSTVEEHL
EDASEDHIVFSHGQVVPLNSLPRTTPTWTDGDIVLRQVPIIAPSGDVVCP
SLSIKISPGSHFLITGPNGCGKSSLFRILSGLWPVYGGGQLSIPYPSDTF
YIPQRPYMTLGTLRDQVIYPDSIGEMKRKGWTDETLEGILEQVYLKYVIE
REGGFDTVSDWMDVLSGGEKQRMGMARMFYHKPKFALLDECTSAVSIDVE
GKMYQAAKDSGITLLTITHRPSLWKFHSHLLKFDGEGGWSIEEMNANTRL
TLNEEKERLEAQLADVPKAQERLNELCAILGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032685XLOC_032685Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051624TCONS_00051624Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 702..722
NoneNo IPR availableGENE3D1.20.1560.10coord: 87..435
e-value: 8.6E-36
score: 123.0
NoneNo IPR availableGENE3D3.40.50.300coord: 481..723
e-value: 1.5E-33
score: 115.7
NoneNo IPR availableCDDcd03223ABCD_peroxisomal_ALDPcoord: 483..689
e-value: 3.05875E-84
score: 265.171
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 508..693
e-value: 2.2E-6
score: 37.2
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 502..643
e-value: 2.6E-16
score: 60.3
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 483..711
score: 13.232
IPR011527ABC transporter type 1, transmembrane domainPFAMPF06472ABC_membrane_2coord: 81..365
e-value: 1.6E-89
score: 299.9
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 111..348
score: 9.779
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 107..412
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 615..629
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 475..684

Blast
[Close]
BLAST of TCONS_00051624-protein vs. Swiss-Prot (Human)
Match: ABCD2 (ATP-binding cassette sub-family D member 2 OS=Homo sapiens GN=ABCD2 PE=1 SV=1)

HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0
Identity = 385/660 (58.33%), Postives = 497/660 (75.30%), Query Frame = 0 
Query:   80 INKEYYEKLMQIIKIILPGVWTKEFAFLSAHTIALICRAFLSIYVATLDGKLAKCIVEKKLMRFLYLLTQWIGIAVPATFINSLLKYLEGKLSLAFRTQLVRHAYKLYFDKQTYYKVGNLDSRLSSPDESLTEDLRLFCDSIAHLYSHMTKPILDLLLVCMTLSKMSNKRGQSWIQPISIASLVTVTTGHILKMSSPAFGKLVSEESSRRGTLRTVHSRVITNSEEIAFYGGHKVEHNLLQKTYQSLAGQINLILRKKLWYVMLEQFLMKYVWSASGLIMVSLPIMLGKDVS----GSMSEQISERSQAFTTSRNLLLSGADAVERIMTSFKEIIELAGYTERVHSMLSVFEDIHKEHYIR---LPASKSFSTVEEHLEDASEDHIVFSHGQVVPLNSLPRTTPTWTDGDIVLRQVPIIAPSGDVVCPSLSIKISPGSHFLITGPNGCGKSSLFRILSGLWPVYGGGQLSIPYPSDTFYIPQRPYMTLGTLRDQVIYPDSIGEMKRKGWTDETLEGILEQVYLKYVIEREGGFDTVSDWMDVLSGGEKQRMGMARMFYHKPKFALLDECTSAVSIDVEGKMYQAAKDSGITLLTITHRPSLWKFHSHLLKFDGEGGWSIEEMNANTRLTLNEEKERLEAQLADVPKAQERLNELCAILGE 732
            +N +++++L+++ KI+ P + T E  +L  H++ALI R FLSIYVA LDGK+ K IVEKK   F+  L +W+ IA+PATF+NS ++YLE KL+LAFRT+LV HAY+ YF  QTYYKV N+D RL++PD+SLTED+ +F  S+AHLYS++TKPILD++L   TL + +  RG S I P  +A LV   T  +LK  SP FGKLV+EE+ R+G LR VHSR+I N EEIAFY GHKVE   LQK+Y++LA Q+NLIL K+LWY+M+EQFLMKYVWS+SGLIMV++PI+     +    G     +SER++AFTT+RNLL SGADA+ERIM+S+KE+ ELAGYT RV++M  VF+++ +  Y R   +  S+S S     +E    D +    G+V+ +           D  I+   VPII P+G+VV   L+ K+  G H LITGPNGCGKSSLFRILSGLWPVY  G L  P P   FYIPQRPYM+LG+LRDQVIYPDS+ +M  KG+TD+ LE IL  V+L ++++REGG+D V DW DVLSGGEKQRMGMARMFYHKPK+ALLDECTSAVSIDVEGK++QAAK +GI+LL+ITHRPSLWK+H+HLL+FDGEGGW  E+++   RLTL+EEK++LE+QLA +PK Q+RLNELC ILGE
Sbjct:   80 VNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWLMIAIPATFVNSAIRYLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALADQMNLILSKRLWYIMIEQFLMKYVWSSSGLIMVAIPIITATGFADGEDGQKQVMVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQESESHSKNGAKVELPLSDTLAIK-GKVIDV-----------DHGIICENVPIITPAGEVVASRLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVY-EGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYTDQDLERILHNVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLLQFDGEGGWRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNELCKILGE 726
The following BLAST results are available for this feature:
BLAST of TCONS_00051624-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCD20.000e+058.33ATP-binding cassette sub-family D member 2 OS=Homo... [more]
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