TCONS_00051648-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051648-protein
Unique NameTCONS_00051648-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051648-protein ID=TCONS_00051648-protein|Name=TCONS_00051648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MFLVVFDGKWDSPGDSEYKRQVDDKLHRKKERSVKTKEIELKHDKRYQRD
KHRSKDERSRDTISGDDSRKKHELEQDLKRTHNKEHRKHDNEWEHKQRLS
HSDSNEKHSGHDHDHNHSDKKHDIKIKKEPSGWDDEKPRPDQTENKRRQE
EDRDRDREKRDRNRHNNRDRDGHDVHRDRNSRDNRDNQNRNDSNRQRHSN
REWDRGKRANRREEDDSNFNFGAEGRDESSTNDKKETVSKEEPNYELSGK
LTEYTNTYNGVVIKYNEPSEARKPKTKWRLYPFKGDKSLPLLQIHRQSAF
LLGRDRKVFRYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032691XLOC_032691Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051648TCONS_00051648Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availableGENE3D2.60.200.20coord: 225..309
e-value: 1.0E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..251

Blast
[Close]
BLAST of TCONS_00051648-protein vs. Swiss-Prot (Human)
Match: SNIP1 (Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.668e-30
Identity = 74/174 (42.53%), Postives = 100/174 (57.47%), Query Frame = 0 
Query:  140 PDQTENKRRQEEDRDRDR-EKRDRNRHNNRDRDGHDVHRDRNSRDNRDNQNRNDSNRQRHSNREWDRGKRANRREEDDSNFNFGAEGRD----ESSTNDKKETVSKEEPNYELSGKLTEYTNTYNGVVIKYNEPSEARKPKTKWRLYPFKGDKSLPLLQIHRQSAFLLGRDRKV 308
            P + E++R +  DRDR R     R   N R   G    RDR      D QN      +R    E+   +R   R+ +D     G+E ++        N +KE  +KE+P++ELSG L E TNT+ GVVIKY+EP EAR PK +WRLYPFK D+ LP++ IHRQSA+LLGR R++
Sbjct:  127 PSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDR------DTQNLQAQEEER----EFYNARRREHRQRNDVGGG-GSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRI 289
The following BLAST results are available for this feature:
BLAST of TCONS_00051648-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNIP12.668e-3042.53Smad nuclear-interacting protein 1 OS=Homo sapiens... [more]
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