TCONS_00051663-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051663-protein
Unique Name	TCONS_00051663-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1006

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051663-protein ID=TCONS_00051663-protein|Name=TCONS_00051663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1006bp
GETFTRFYFFVIKIKMAEKKTTSNSGIFGQSLGGDLDLSQFSGPKLFTPA
PLPPAPTIPQTLPQQSHVSNSPLPAPNTPIPPPSQYHTPLQTPNISSNFN
PAAPQPQRLPPLPTTTPPKQYDATQVLRQTPRPNMTPVPLTQGLDNVPLQ
SPPMNVTPFGGTNHPPAPMIPTFTPSNQTNQFLTGPMIPPSNTPAQVFNP
TMSPQQAQTGAFNQPSTYNPKVFTPNQPPKAPTMFVPPSNPEPSANNYYT
PSQNMNQAPAMSGYQQQQALPTEYNISPFASMNTQQNLMHSVPKVTPHWF
YLRTWTIHLPFYKKMTEWQVFSKADSHKLEHEYLLHRGTKNGGSVVVQTD
GGRYDVDLNDMTRNSVYWKEEPSTVRRCTWFYKEENQFLPYETEPAEKLE
EEYLSMMSKGIFNIRVDISQNDFVLFHNPDTMVQYSNNQDLQWTGEDAKT
RPKIVRRGIADEVYQQIPQGEEGSIEHVVFVIHGIGPVADLRGRTIVECV
DDLRRHSLHFTNNNGFTIQGRPANRVEFFPIQWYSSIRDEKFGIDKQLEQ
LSLPSISKLRHFTNETLTDILFFTSPLYCQTIVDTVITEMNRIYKLFKSR
NPTYNGTTSVCGHSLGSVIAFDILANQGKQKNQQQVNGHQQPSSYENSGE
VVEDTILRGSSGPPSRNSSAPPSLDTSMSDLSLDDVTNMHDLLAKLNLLS
LEQQFEDEQIDLDTLLMCQDGDLKDLGVPFGPRKKLVAYMKNKDNPQPTS
AQKNPSAPTNNTTLLTRGTNTANSSDQSDLSLKSAGSGTGQPVVTYKALD
FQTDSLFALGSPIGLFLTTRGVTTLGLEYRLPFCNSFMNIFHPYDPVVYR
LEPLVNEMIDIPPVLIPHHKGRKRFHLEIKDNITRVSAKVKSGIMDAVNR
TWTSINDFARSHQPDYQPAHDDSLSVVGENEALDTTNTEEEMALKARENA
LDFGQLNSGKRVDFALQEKPFEILNEYLFALGSHTCYWTSEDVALLMLKQ
IYKINE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032700	XLOC_032700	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051663	TCONS_00051663	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004177	DDHD_dom
IPR001660	SAM
IPR004170	WWE-dom
IPR013761	SAM/pointed

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004177	DDHD domain	SMART	SM01127	DDHD_2a	coord: 799..1003 e-value: 1.7E-61 score: 220.3
IPR004177	DDHD domain	PFAM	PF02862	DDHD	coord: 799..1002 e-value: 8.3E-52 score: 176.6
IPR004177	DDHD domain	PROSITE	PS51043	DDHD	coord: 799..1003 score: 48.026
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 681..746 e-value: 0.0029 score: 26.8
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 691..739 e-value: 2.5E-6 score: 27.7
IPR004170	WWE domain	PFAM	PF02825	WWE	coord: 311..377 e-value: 4.4E-6 score: 27.1
IPR004170	WWE domain	PROSITE	PS50918	WWE	coord: 284..377 score: 9.585
None	No IPR available	GENE3D	1.10.150.50		coord: 666..753 e-value: 8.6E-9 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 631..650
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..681
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 743..789
IPR013761	Sterile alpha motif/pointed domain	SUPERFAMILY	47769	SAM/Pointed domain	coord: 685..741

Blast

[Close]

BLAST of TCONS_00051663-protein vs. Swiss-Prot (Human)
Match: S23IP (SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1)

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 311/799 (38.92%), Postives = 452/799 (56.57%), Query Frame = 0

Query:  236 VPPSNPEPSANNYYTPSQNMNQAPAMSGYQQQQALPTEYNISPFASMNTQQNLMHSVPKVTPHWFYLRTWTIHLPFYKKMTEWQVFSKADSHKLEHEYLLHRGTKNGGSVVVQTDGGRYDVDLNDMTRNSVYWKEEPSTVRRCTWFYK--EENQFLPYETEPAEKLEEEYLSMMSKGIFNIRVDISQNDFVLFHNPDTMVQY--SNNQDLQWTGEDAKTRPKIVRRGIADEVYQQIPQGEEGSIEHVVFVIHGIGPVADLRGRTIVECVDDLRRHSLHFTNNN-GFTIQGRPANRVEFFPIQWYSSIRDEKFGIDKQLEQLSLPSISKLRHFTNETLTDILFFTSPLYCQTIVDTVITEMNRIYKLFKSRNPTYNGTTSVCGHSLGSVIAFDILANQGKQKNQQQVNGHQQPSSYENSGEVVEDTILRGSSGPPSRNSSAPPSLDTSMSDLSLDDVTNMHDLLAKLNLLSLEQQFEDEQIDLDTLLMCQDGDLKDLGVPFGPRKKLVAYMKNKDNPQ-------------PTSAQKNPSAPTNNTTLLTRGTN-------TANSSDQSDLSLKSAGSGTGQPVVTYKALDFQTDSLFALGSPIGLFLTTRGVTTLGLEYRLPFCNSFMNIFHPYDPVVYRLEPLVNEMIDIPPVLIPHHKGRKRFHLEIKDNITRVSAKVKSGIMDAVNRTWTSINDFARSHQPDYQPAHD-----DSLSVVGENEALDTTNTEEEMALKARENAL-DFGQLNSGKRVDFALQEKPFEILNEYLFALGSHTCYWTSEDVALLMLKQIYK 1003
            +PP +  P  ++  +P+Q   Q PA  G       P+    SPF   N  +        V PHWFY +        YK++  W  FS  DS  LE  Y  +    +  SVV+ TDGGRYDV L D  R + YW+EEP+ VRRCTWFYK   +++F+PY  E +EKLE EY   ++   ++ R++    + ++ HNP  +VQ+  S+  D   T +D +TRP++V+RGI D +  +IP GE   ++H+VFV+HGIGPV DLR R+I+ECVDD R  SL     +   ++     +RVEF P+ W+SS+  +  G+D+ +++++LPSI + RHFTNETL DILF+ SP YCQTIV+ V  E+N ++ LF SRNP + G  SV GHSLGS+I FDIL+NQ      + +N  + P     +  VV+    +    P     +   S D  + +    +V  + + L  L+L      FE E+ID+++LLMC   DLK++G+P GPRKK+  ++++K                  T  Q+  +  T +   L   +N                ++ +S   G GQ  V Y +LDF+ +  FALGSPI +FLT RGV  +   Y LP C  F NI+HP DPV YRLEP++   +D+  VLIPHHKGRKR HLE+K++++R+ + +K G + ++   W ++N+FAR+H    Q   +     + +    E + ++     E       E+ L   G LN G+R+D+ LQEKP E  NEYLFAL SH CYW SED ALL+LK+IY+
Sbjct:  225 MPPGSLPPVPSSVQSPAQQ--QVPARPG------APSVQVPSPFLLQNQYE-------PVQPHWFYCKEVE-----YKQL--WMPFSVFDSLNLEEIY--NSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTRPRVVKRGIDDNL-DEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDILSNQ------KDLNLSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVEN---KEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKKAASEKKAVAATSTKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLDFEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEEEKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYR 989

The following BLAST results are available for this feature:

BLAST of TCONS_00051663-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S23IP	0.000e+0	38.92	SEC23-interacting protein OS=Homo sapiens GN=SEC23...	[more]

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TCONS_00051663-protein (polypeptide) - C. hemisphaerica